Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 694 a.a., DNA primase from Synechococcus elongatus PCC 7942

 Score =  275 bits (702), Expect = 6e-78
 Identities = 157/419 (37%), Positives = 239/419 (57%), Gaps = 18/419 (4%)

Query: 16  RLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYHCFGCGAHGNAIDFVM 75
           R DIVD++  +V LKK+GK++   CPFH++K+PSF+VS  KQFY+CF CGA GN I F+M
Sbjct: 17  RADIVDIVSEQVVLKKRGKDFVGLCPFHDDKSPSFTVSPAKQFYYCFSCGAGGNPIKFLM 76

Query: 76  EYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDKRSLYDLMGSIAQFYR 135
           E  +  F E + +LA    + V+  E        +         +  LY+++    QFY 
Sbjct: 77  ELGKQSFSEVVLDLAKRYQVPVRTLEVQQHQELQRQLSR-----RERLYEVLAVATQFYE 131

Query: 136 QQLKVPANKHAIEYLK-NRGLSGEIVQKFGIGYIADEW-DLVRRNFGQQRSSEDMLVTAG 193
           Q L+ P    A++YL+ +R L    +QKF +GY   +W  L      Q+R   D++  AG
Sbjct: 132 QSLRRPEGAAALDYLRRSRQLQESTIQKFQLGYAPAQWASLATHLIEQKRFPADLVEEAG 191

Query: 194 MLIENDNGRRY-DRFRGRVMFPIRDRRGRVIGFGGRITEQGTPKYLNSPETPIFHKGKEL 252
           +++   NG+ Y DRFR R+M PI D +GRV+GFGGR      PKYLNSPET +F KGK L
Sbjct: 192 LVVARRNGQGYYDRFRDRLMIPIHDLQGRVVGFGGRTLTGEEPKYLNSPETTLFEKGKLL 251

Query: 253 YGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTTGDHLQLLFR--QTNH 310
           +GL +   A  +  Q +VVEGY DV+AL   G+D++VASLGT+ +   ++LL R  ++N 
Sbjct: 252 FGLDKARAAIAKQDQAVVVEGYFDVIALHAAGIDHAVASLGTALSRQQVKLLSRYSESNQ 311

Query: 311 VICCYDGDRAGRDAAWRALENALSYLKSGNI-LKFLFLPDGEDPDSYVRKYGKADFEQQV 369
           ++  +D DRAG  AA RA+         G + L+ L LP G+D D Y++++  AD+ + +
Sbjct: 312 IVLNFDADRAGAKAAERAIGEVEDLAYQGQVQLRVLNLPGGKDADEYLQRHSVADYRELL 371

Query: 370 ANATPLSQYLFENLIELHQINLGSHEGKSALRAVATPLIDKIPDP-----FLQEILEKL 423
           A +     +  + L  L   NL   +   A+      L+ K+P+      ++ ++ E+L
Sbjct: 372 ARSPLWLDWQIDQL--LRDRNLDQADQFQAVVQAIVQLLGKLPNTPLRTHYVHQVAERL 428