Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 603 a.a., DNA primase from Ralstonia solanacearum GMI1000

 Score =  397 bits (1020), Expect = e-115
 Identities = 249/604 (41%), Positives = 350/604 (57%), Gaps = 39/604 (6%)

Query: 5   IPRSFIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYHCFGC 64
           IP+ FIDDLL R+DIVDV+   V+LKK G N+   CPFHNEK+PSF+VS  KQFYHCFGC
Sbjct: 2   IPQPFIDDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFGC 61

Query: 65  GAHGNAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDKRSLY 124
           GAHG+AI F+ME+  + + EAI +LA ++G+ V  EER    P A+     K+    +L 
Sbjct: 62  GAHGSAIGFLMEFSGLSYVEAIRDLAQSVGMAVP-EERGGLPPAARAERQAKTV---ALG 117

Query: 125 DLMGSIAQFYRQQLKVPANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVRRNFGQQRS 184
           D+M   +  YR+QL+      A++YLK RGL+GEI   FG+GY  D+W  +   FG  R 
Sbjct: 118 DVMARASDHYRKQLRGAPG--AVQYLKGRGLTGEIAGHFGLGYAPDDWQSLESVFGAYRD 175

Query: 185 SE--DMLVTAGMLIENDNG------RRYDRFRGRVMFPIRDRRGRVIGFGGRITEQGTPK 236
                 L+ AG++IE++        RRYDRFR R+MFPIR+ +G VIGFGGR+  QG PK
Sbjct: 176 DAIATPLIEAGLVIESEKTDADGRHRRYDRFRDRIMFPIRNTKGVVIGFGGRVLGQGEPK 235

Query: 237 YLNSPETPIFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTST 296
           YLNSPETP+F KG ELYGL+E   A RE   +LVVEGYMDVVALAQ G   +VA+LGT+ 
Sbjct: 236 YLNSPETPLFSKGTELYGLFEARNAIREFGYVLVVEGYMDVVALAQLGFANAVATLGTAC 295

Query: 297 TGDHLQLLFRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSY 356
           T  H+Q L RQ + VI  +DGD AGR AA RALE  L ++    I+KFLFLP   DPD++
Sbjct: 296 TPVHVQKLLRQVDTVIFSFDGDAAGRRAARRALEACLPHVTDNKIVKFLFLPPEHDPDTF 355

Query: 357 VRKYGKADFEQQVANATPLSQYLFENLIELHQINLGSHEGKSALRAVATPLIDKIPDPFL 416
           +R+ G   F  +V NA PLS++L + + E   ++L   EG++  +  A PL+  +P   L
Sbjct: 356 IREEGTEAFAAEVRNAMPLSRFLLQAVTE--DLDLRQPEGRARAQYEAKPLLSAMPPGGL 413

Query: 417 QEILEKLLDERTGFDHQ-------LRRKKA---RKTENRPAPHKAIKRTPMRDVIALLIQ 466
           +  + + L E TG           LR   A   R T+ RP   +       + V+ LL++
Sbjct: 414 RLQIVRGLAEMTGTTPADIEALCGLRSDPAQAGRMTQKRPRVARTAPTALEQKVLRLLMR 473

Query: 467 NPSYAELVPDLASVRHLMIPGL---DTFSEVLEKC-RQYPHITTGQLLEHWRDSKNETLL 522
            P+ A  + D  +   L  P L   +  S +L +C    P +  G  +E    +      
Sbjct: 474 YPALAARL-DADTRTQLTAPELPQGEVLSGLLAECDTAGPEMHFGAFVERLGQT---PYA 529

Query: 523 SRLASWEIPLVEDNQE-----ELFLDSLDKILAQCVEKQIENLQAKERSVGLSTEEKREL 577
              A   + ++ D+ E     + F  ++ K+LA+ + +++E LQ K      +  +K  L
Sbjct: 530 EAFAGLRVAVLNDDIELEPATQEFDAAVQKMLAEPLRRELEMLQRKMEGGHATDADKERL 589

Query: 578 QDLI 581
           + L+
Sbjct: 590 RWLV 593