Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 584 a.a., DNA primase, catalytic core from Dechlorosoma suillum PS

 Score =  438 bits (1127), Expect = e-127
 Identities = 261/589 (44%), Positives = 355/589 (60%), Gaps = 35/589 (5%)

Query: 5   IPRSFIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYHCFGC 64
           IP SF+ +LL R+DIVD+ID  V LKK G NY+ACCPFHNEK+PSF+VS  KQFYHCFGC
Sbjct: 2   IPESFLQELLHRVDIVDLIDGYVPLKKAGANYAACCPFHNEKSPSFTVSPTKQFYHCFGC 61

Query: 65  GAHGNAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDKRS-- 122
           GAHG AI F+MEY  + F +A++ELA  +G+ V  E              V+ E  R+  
Sbjct: 62  GAHGTAIRFLMEYSGLGFIDAVKELAGRMGMVVPEE-----------AGRVRHEGPRTAE 110

Query: 123 LYDLMGSIAQFYRQQLKVPANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVRRNFGQQ 182
           L ++MG  AQ+Y +QLK   +  A EYLK RGL+GEI  KF IGY  +    ++  F   
Sbjct: 111 LTEVMGKAAQYYFEQLK--HSDKAKEYLKRRGLTGEIALKFRIGYAPEGKYGLKGAFPNY 168

Query: 183 RSSEDMLVTAGMLIENDNGRRYDRFRGRVMFPIRDRRGRVIGFGGRITEQGTPKYLNSPE 242
            + E  L  AG++ + ++GRRYDRFR RVMFPI +++  VI FGGR+ +QG PKYLNSPE
Sbjct: 169 DAPE--LEKAGLVKQTEDGRRYDRFRDRVMFPIINQKNEVIAFGGRVIDQGEPKYLNSPE 226

Query: 243 TPIFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTTGDHLQ 302
           TP+F KG+EL+GL +  QA RE   ++VVEGYMDVVALAQ+GV  +VA+LGT+TT  H+Q
Sbjct: 227 TPLFEKGRELFGLPQARQALREKNTVIVVEGYMDVVALAQHGVGNAVATLGTATTATHVQ 286

Query: 303 LLFRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSYVRKYGK 362
            L RQ + ++ C+DGD AGR AAWR LEN+L  L     + F+FLP   DPDSYVR+ GK
Sbjct: 287 KLLRQVDRIVYCFDGDAAGRKAAWRGLENSLESLADNKSIGFVFLPPEHDPDSYVRELGK 346

Query: 363 ADFEQQVANATPLSQYLFENLIELHQINLGSHEGKSALRAVATPLIDKIPDPFLQEILEK 422
             FE+ +  A PLS +L + L      +L + EGKS L   A PLI ++  P L+  L K
Sbjct: 347 EAFERMIDQAMPLSDFLLKELAS--HCDLTTSEGKSKLVYEAKPLIQRLATPLLRLQLVK 404

Query: 423 LLDERTGFDHQ-LRRKKARKTENRPAPHKAIKR--TPMRDVIALLIQNPSYAELVPDLAS 479
            L E + F  Q + R    K   R AP +A ++  +  R ++ L++  P +A  +P    
Sbjct: 405 RLAEASSFSQQEVERLCDLKPVARAAPARAPRQALSLPRTLLRLVLHRPDFAARLP---- 460

Query: 480 VRHLMIPGLDTFSEVLEK-CRQYPH----ITTGQLLEHWRDSKNETLLSRLAS--WEIPL 532
             H  +P   T +  L + C Q        ++  LLE  R   +E +L   A+   + P 
Sbjct: 461 -LH-WLPADSTETRALRRLCEQIKRDADLPSSAMLLERLRGGDDEAILQSAAASLLQSPQ 518

Query: 533 VEDNQEELFLDSLDKILAQCVEKQIENLQAKERSVGLSTEEKRELQDLI 581
            E+  E+ F  +L ++    VE++   LQ K    GL +EEKRE   L+
Sbjct: 519 SEEESEQEFAGALARLEMNWVEQEFRRLQHKAAGGGLDSEEKREFVHLL 567