Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., Probable DNA primase DnaG from Mycobacterium tuberculosis H37Rv

 Score =  197 bits (501), Expect = 1e-54
 Identities = 159/522 (30%), Positives = 234/522 (44%), Gaps = 44/522 (8%)

Query: 1   MAGHIPRSFIDDLLARLDIVDVIDARVKLKKKGKN-YSACCPFHNEKTPSFSVSQEKQFY 59
           M+G I    I  +     I DV+   V+L++ G +     CPFHNEK+PSF V      +
Sbjct: 1   MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60

Query: 60  HCFGCGAHGNAIDFVMEYERMEFPEAIEELASTIG---------LEVQREERTPSSPFAK 110
           HCFGCG  G+   F+ + E + F EA+E LA  IG           VQR+  + S   A 
Sbjct: 61  HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120

Query: 111 NTPAVKSEDKRSLYDLMGSIAQFYRQQLKVPANKHAIEYLKNRGLSGEIVQKFGIGYIAD 170
           N  A                A FY Q L+      A +YL  R       +KFG G+   
Sbjct: 121 NAAA----------------AAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPS 164

Query: 171 EWDLVRRNFGQQRSSEDMLVTAGMLIENDNGRRYDRFRGRVMFPIRDRRGRVIGFGGR-- 228
            WD + ++  ++    + L  AG+  +  +G   DRF  R+++PIR   G V+GFG R  
Sbjct: 165 GWDSLTKHLQRKGFEFEELEAAGLSRQGRHG-PMDRFHRRLLWPIRTSAGEVVGFGARRL 223

Query: 229 -ITEQGTPKYLNSPETPIFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDY 287
              +    KY+N+PET ++ K   ++G+    +   +  Q +VVEGY DV+A+   GV  
Sbjct: 224 FDDDAMEAKYVNTPETLLYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTT 283

Query: 288 SVASLGTSTTGDHLQLLFRQ-------TNHVICCYDGDRAGRDAAWRALENALSYLKSGN 340
           +VAS GT+  G+HL +L R           +I  +DGD AGR AA +A +          
Sbjct: 284 AVASCGTAFGGEHLAMLRRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSF 343

Query: 341 ILKFLFLPDGEDPDSYVRKYGKADFEQQVANATPLSQYLFENLIELHQINLGSHEGKSAL 400
           +      PDG DP     K G A     VA  TPL ++     I   +++L S EG+ A 
Sbjct: 344 V---AVAPDGMDPCDLRLKCGDAALRDLVARRTPLFEFAIRAAIA--EMDLDSAEGRVAA 398

Query: 401 RAVATPLIDKIPDPFLQEILEKLLDERTGFDHQLRRKKARKTENRPAPHKAIKRTPMRDV 460
                P++ +I DP L++   + L    G+    +     + E +   H  + R      
Sbjct: 399 LRRCVPMVGQIKDPTLRDEYARQLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLG-STT 457

Query: 461 IALLIQNPSYAELVPDLASVRHLMIPGLDTFSEVLEKCRQYP 502
           IA   Q P+ A    +LA       P L    E L+   QYP
Sbjct: 458 IARAAQRPT-AGPPTELAVRPDPRDPTLWPQREALKSALQYP 498