Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 575 a.a., protein containing DNA primase, DnaG/TOPRIM from Marinobacter adhaerens HP15

 Score =  371 bits (952), Expect = e-107
 Identities = 192/424 (45%), Positives = 275/424 (64%), Gaps = 23/424 (5%)

Query: 1   MAGHIPRSFIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYH 60
           M+G IP+ F+++LL R+D+ ++I +R+ LKK G NY ACCPFH+EKTPSF+V  +K FYH
Sbjct: 1   MSGLIPQQFVENLLDRIDLAELIGSRITLKKAGANYKACCPFHDEKTPSFNVRPDKGFYH 60

Query: 61  CFGCGAHGNAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDK 120
           CFGCGAHG+AI FV E+E + F EA+EELA  +GLEV      P    AK     + +  
Sbjct: 61  CFGCGAHGDAISFVREFEGLGFTEAVEELAKRVGLEV------PYDRAAKQ----EIQQA 110

Query: 121 RSLYDLMGSIAQFYRQQLKVPANKHAIEYLKNRGLSGEIVQKFGIGYIADE----WDLVR 176
           R+L D +   ++FY+  LK     +A +YL+ RGL   I++++ +GY        +D+  
Sbjct: 111 RTLTDALDFASRFYQSALKGQQGAYARDYLQQRGLDNAIIEQYQVGYAPSTGTALFDVAS 170

Query: 177 RNFGQQRSSEDMLVTAGMLIENDNGRRYDRFRGRVMFPIRDRRGRVIGFGGRITEQGTPK 236
           ++       +  L+  G  + +  G+  D FR RVMFPIR+ RGR + FGGR       K
Sbjct: 171 KDL------QGPLIETGT-VSDKYGKPRDLFRNRVMFPIRNSRGRTVAFGGRTLGDDKAK 223

Query: 237 YLNSPETPIFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTST 296
           Y+NSPE+ +FHK +E+YGL+E  QA R+  ++LVVEGYMDV+ALAQ+G+ Y+VA+LGT+T
Sbjct: 224 YINSPESDVFHKSREIYGLFEAKQAIRQLDKLLVVEGYMDVIALAQHGIHYAVATLGTAT 283

Query: 297 TGDHLQLLFRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSY 356
             D L  L +Q  H++ C+DGD+AG  AA RA+ENAL  +  G  L+FL LP GEDPD+ 
Sbjct: 284 NQDSLTALLKQVRHIVFCFDGDQAGFRAADRAMENALELMADGLHLQFLMLPQGEDPDTL 343

Query: 357 VRKYGKADFEQQVANATPLSQYLFENLIELHQINLGSHEGKSALRAVATPLIDKIPDPFL 416
           VRK G   F++++  ATPLS+YLF+   E   + L  H G+  LRA   PL++K+P   L
Sbjct: 344 VRKEGPEAFQKRIEGATPLSRYLFDRQSEGLDLQLPEHRGE--LRARVEPLLNKMPRSTL 401

Query: 417 QEIL 420
           ++ +
Sbjct: 402 RDAM 405