Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 581 a.a., DNA primase from Klebsiella michiganensis M5al

 Score =  616 bits (1588), Expect = 0.0
 Identities = 317/582 (54%), Positives = 408/582 (70%), Gaps = 16/582 (2%)

Query: 1   MAGHIPRSFIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYH 60
           MAG IPR FI+DLLAR DIVD+IDARVKLKK+GKNY ACCPFHNEKTPSF+V+ EKQFYH
Sbjct: 1   MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNYHACCPFHNEKTPSFTVNGEKQFYH 60

Query: 61  CFGCGAHGNAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDK 120
           CFGCGAHGNAIDF+M Y+++EF E +EELA+   L+V  E  +  S        ++   +
Sbjct: 61  CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLDVPYEAGSGPSQ-------IERHQR 113

Query: 121 RSLYDLMGSIAQFYRQQLKVPANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVRRNFG 180
           ++LY LM  +  FY+Q L  PA   A +YL+ RGLS E++ +F IGY    WD V + FG
Sbjct: 114 QNLYQLMDGLNTFYQQSLMQPAADPARQYLEKRGLSSEVITRFAIGYAPPGWDNVLKRFG 173

Query: 181 QQRSSEDMLVTAGMLIENDNGRRYDRFRGRVMFPIRDRRGRVIGFGGRITEQGTPKYLNS 240
             + +   L+ AGML+ ND GR YDRFR RVMFPIRD+RGRVIGFGGR+     PKYLNS
Sbjct: 174 GNQENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGDALPKYLNS 233

Query: 241 PETPIFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTTGDH 300
           PET IFHKG++LYGLYE  Q   EP ++LVVEGYMDVVALAQ+G++Y+VASLGTSTT DH
Sbjct: 234 PETDIFHKGRQLYGLYEAQQDNAEPSRLLVVEGYMDVVALAQFGINYAVASLGTSTTADH 293

Query: 301 LQLLFRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSYVRKY 360
           +QLLFR TN V+CCYDGDRAGRDAAWRALE AL Y+  G  L+F+FLPDGEDPD+ VRK 
Sbjct: 294 IQLLFRVTNQVVCCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKE 353

Query: 361 GKADFEQQVANATPLSQYLFENLIELHQINLGSHEGKSALRAVATPLIDKIPDPFLQEIL 420
           GKA FE ++  A PLS +LF +L  L Q++L + +G++ L  +A PLI ++P   L+  L
Sbjct: 354 GKAAFEARMEQAQPLSTFLFNSL--LPQVDLSTPDGRAQLSTLALPLITQVPGETLRIYL 411

Query: 421 EKLLDERTGF--DHQLRRKKARKTEN---RPAPHKAIKRTPMRDVIALLIQNPSYAELVP 475
            + L  + G   D QL R   +++EN   RPAP   +KRT MR +I LL+QNP  A LVP
Sbjct: 412 RQELGNKLGILDDAQLERLMPKQSENGIQRPAPQ--LKRTTMRILIGLLVQNPDLAPLVP 469

Query: 476 DLASVRHLMIPGLDTFSEVLEKCRQYPHITTGQLLEHWRDSKNETLLSRLASWEIPLVED 535
            L  +    +PGL  F+E+++ C   P +TTG LLE +R +     L +L+ W+    +D
Sbjct: 470 PLEGLDPRKMPGLGLFNELVKTCLAQPGLTTGLLLEQYRGTNEAATLEKLSMWDDIADKD 529

Query: 536 NQEELFLDSLDKILAQCVEKQIENLQAKERSVGLSTEEKREL 577
             E+ F DSL+ +    +E + E L A++R+ GLS+EE+REL
Sbjct: 530 IAEKTFTDSLNHMFDSLLELRQEELIARDRTHGLSSEERREL 571