Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 578 a.a., DNA primase from Dyella japonica UNC79MFTsu3.2

 Score =  485 bits (1248), Expect = e-141
 Identities = 265/584 (45%), Positives = 374/584 (64%), Gaps = 20/584 (3%)

Query: 1   MAGHIPRSFIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYH 60
           M G IP +FID+LL+R+DIVDVI+ RV LKK G+ ++ACCPFHNE++PSF VS  KQF+H
Sbjct: 1   MRGRIPDTFIDELLSRVDIVDVIERRVPLKKAGREWTACCPFHNERSPSFYVSPAKQFFH 60

Query: 61  CFGCGAHGNAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDK 120
           CFGCGAHG+AI F+M+Y+R+EFP+A+EELA ++GL+V  E    ++P          EDK
Sbjct: 61  CFGCGAHGSAIKFLMDYDRLEFPDAVEELAQSVGLKVPYEGGRDNAP---------REDK 111

Query: 121 RSLYDLMGSIAQFYRQQLKVPANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVRRNFG 180
             LY L+   A++Y  QL  P +  A  Y K RGL  + + +F IG+    +D V +  G
Sbjct: 112 TDLYALLDGSARWYENQL--PHSPEAQAYCKKRGLDADTIARFRIGWAPAGFDGVLKALG 169

Query: 181 QQRSSEDMLVTAGMLIENDNGRRYDRFRGRVMFPIRDRRGRVIGFGGRI--TEQGTPKYL 238
                  +L  AGM+  N+ G +YDRFR R+MFPI DRRGRVI FGGR+  +EQG PKYL
Sbjct: 170 TDAKRMQLLNDAGMVASNERGNKYDRFRERLMFPILDRRGRVIAFGGRVLQSEQG-PKYL 228

Query: 239 NSPETPIFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTTG 298
           NSPET +FHKG+EL+ L++V QA     +I+VVEGYMDV+A+ Q G+  +VA+LGT+TT 
Sbjct: 229 NSPETALFHKGRELFALWQVKQANSSLARIVVVEGYMDVIAMHQAGLPIAVATLGTATTP 288

Query: 299 DHLQLLFRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSYVR 358
           DH ++LFR    V+ C+DGDRAGR AAW+ALE AL  L+ G    FLFLPDGEDPD+ +R
Sbjct: 289 DHTEVLFRAAPDVVFCFDGDRAGRAAAWKALEAALPRLRDGRQAYFLFLPDGEDPDTLIR 348

Query: 359 KYGKADFEQQVANATPLSQYLFENLIELHQINLGSHEGKSALRAVATPLIDKIPDPFLQE 418
           K GK  FEQ++ NATPLS+Y F  L   H +++GS +G++ L   A PLI ++PD   ++
Sbjct: 349 KEGKQGFEQRLKNATPLSEYFFGEL--AHDVDVGSIDGRARLAERARPLIARLPDGAFRD 406

Query: 419 ILEKLLDERTGFDHQLRRKKARKTENRPAPHK-AIKRTPMRDVIALLIQNPSYAELVPDL 477
           ++ + L+ RTG    L+   A +   RPA    A++R+ +R  IALL+  P  A+ V   
Sbjct: 407 LMAQELERRTGARAVLQPDAAAR---RPAQQPVAVQRSLVRSAIALLLAQPGMADQVERP 463

Query: 478 ASVRHLMIPGLDTFSEVLEKCRQYPHITTGQLLEHWRDSKNETLLSRLASWEIPLVEDNQ 537
                L  PG++  +E+++  R  P I    L+EH+ +    + L +L +  +    + Q
Sbjct: 464 YGFLRLDKPGIELLAELIDLARSRPGINPVVLVEHFAERPEYSALQKLMAATVVGEPELQ 523

Query: 538 EELFLDSLDKILAQCVEKQIENLQAKERSVGLSTEEKRELQDLI 581
              F D+L ++  Q  E++   L A+ R   L   EK EL++L+
Sbjct: 524 RVEFFDALQRMQQQATEQRRAFLIARSREGTLDGAEKAELRELL 567