Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 830 a.a., primase, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 47.0 bits (110), Expect = 3e-09
 Identities = 65/310 (20%), Positives = 114/310 (36%), Gaps = 56/310 (18%)

Query: 40  CPFHNEKTPSFSVSQEKQFYHCF-GCGAHGNAIDFVMEYERME------FPEAIEELAST 92
           CP H+++  SFS + ++  +HCF  C   G+ +D       +       F     E A+ 
Sbjct: 35  CPLHDDQNQSFSYNVDEDVFHCFRQCVEDGDLVDLYCHVRGLPLRSGEGFKAFRREFAAD 94

Query: 93  IGL---------EVQREERTPSSPFAKNTPAVKSEDKRSLYDLMGSIAQFYRQQLKVPAN 143
            G+         E ++ E       AK +P    E   ++Y+ M  +   +  +L     
Sbjct: 95  AGVGQPARRTPGETRKHEAASQKGAAKRSPRQNLEIPEAVYEAMTPVTPDWAARL----- 149

Query: 144 KHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVRRNFGQQRSSEDMLVTAGMLIENDNGRR 203
                    RG + E++  +G+           R     R   D+     +         
Sbjct: 150 ------YTQRGWTPEVMTTYGV-----------RLLSHFRKKSDLYAVFPL--------- 183

Query: 204 YDRFRGRVMFPIRDRRGRVIGFGGRITEQGTPKYLNSPETPIFHKGKELYGLYEVLQAYR 263
             +   RV+ P+RD +G V+         G P   + P+   + +G     L+      R
Sbjct: 184 --KTIDRVVIPVRDAQG-VLRNLRCYHALGKPPG-DQPKIYSWGRGHGASMLFPPASMLR 239

Query: 264 EPPQILVVEGYMDVVALAQYGVDYSVASLG--TSTTGDHLQLLFRQTNHVICCYDGDRAG 321
            P  +L+ EG  D +    +GV  ++   G       DH + L      V+  YD D+AG
Sbjct: 240 -PGGVLLCEGEGDCLCAFSHGVRNAITQTGKPNEWPEDHAEAL--AGRDVVIAYDADQAG 296

Query: 322 RDAAWRALEN 331
           +  A  A +N
Sbjct: 297 QKYAEAAAKN 306