Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 572 a.a., DNA primase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  228 bits (581), Expect = 5e-64
 Identities = 131/373 (35%), Positives = 213/373 (57%), Gaps = 22/373 (5%)

Query: 8   SFIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYHCFGCGAH 67
           S +  + +RL++VD+    V+L++ G  + A CPFH E  PSFS+++E+ F++CFGC A 
Sbjct: 7   SVVQAIKSRLNLVDIARRYVELRRAGGRWMAPCPFHQETKPSFSINEEEGFFYCFGCQAS 66

Query: 68  GNAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDKRSLYDL- 126
           G+  DF      ++F E +E+LA   G+ +   +     P A+   +++ +  R +YD+ 
Sbjct: 67  GDLFDFYGRINGLDFRETLEQLAEEAGVAL---DDWKPDPRAQQEQSLRRQCLR-MYDVA 122

Query: 127 ----MGSIAQFYRQQLKVPANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVRRNFGQQ 182
               +G++A+   Q+ +        +Y++ R ++ EI++ F +G+   EW  +     + 
Sbjct: 123 RAHFVGNLAKREGQECR--------DYMQRRAIAPEIIESFELGWSLREWQSLADTLRRA 174

Query: 183 RSSEDMLVTAGMLIENDNGRRYDRFRGRVMFPIRDRRGRVIGFGGRI-TEQGTPKYLNSP 241
             ++ + V AG+L  +D+GR YDRFRGR++FPI+   G+VI FGGRI  E    KY+NS 
Sbjct: 175 GFAQGLAVKAGLLATSDSGRAYDRFRGRLIFPIKSLAGQVIAFGGRIIAEDDQAKYINSS 234

Query: 242 ETPIFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTTGDHL 301
           ++PI+ KG  LYGLY+  +A  +    ++ EGYMDV+ L Q+G + +V  LGT+ T + +
Sbjct: 235 DSPIYKKGDHLYGLYQARRAISQHKVAMLTEGYMDVLTLHQFGYNNAVGVLGTALTPEQV 294

Query: 302 QLLFRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSYVRKYG 361
           + L    + V   +DGD AGR AA R+ E     L  G   K + LP GED DS +   G
Sbjct: 295 KRLSGFCSTVELLFDGDNAGRKAALRSCE---MLLVRGMRCKVVLLPQGEDIDSLLHGAG 351

Query: 362 KADFEQQVANATP 374
           +  FE  + N  P
Sbjct: 352 RDAFE-SIRNEAP 363