Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 730 a.a., DNA primase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  259 bits (661), Expect = 4e-73
 Identities = 138/363 (38%), Positives = 208/363 (57%), Gaps = 16/363 (4%)

Query: 10  IDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYHCFGCGAHGN 69
           ID +L    IVDV+   V L+K+G NY   CPFHNEKTPSFSVS  K    CF CG  GN
Sbjct: 7   IDRILDAAQIVDVVSEFVTLRKRGVNYVGLCPFHNEKTPSFSVSPAKGLCKCFSCGKGGN 66

Query: 70  AIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDKRSLYDLMGS 129
           ++ F+ME+E+M + EA++ LA    +E++  E T     A+ T       + S++ +   
Sbjct: 67  SVHFIMEHEQMSYYEALKYLAKKYNIEIKERELTNEEKQAQTT-------RESMFIVNNF 119

Query: 130 IAQFYRQQLK--VPANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVRRNFGQQRSSED 187
              +++  LK  V      + Y + RG   +I++KF +GY  +  D + +   ++   ++
Sbjct: 120 ARDYFQNILKNHVDGRSIGLAYFRQRGFRDDIIEKFQLGYCTESHDAMSQEALRKGYKKE 179

Query: 188 MLVTAGMLIENDNGRRYDRFRGRVMFPIRDRRGRVIGFGGRITEQGTP----KYLNSPET 243
            LV  G+  E D+ R  DRF GRV+FP+    G+V+ FGGR+    T     KY+NSPE+
Sbjct: 180 FLVKTGICYETDDHRLRDRFWGRVIFPVHTLSGKVVAFGGRVLSTATKGVKVKYVNSPES 239

Query: 244 PIFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTTGDHLQL 303
            I+HK  ELYG+Y   QA     +  +VEGY DV+++ Q G++  VAS GT+ T   ++L
Sbjct: 240 EIYHKSNELYGIYFAKQAIVRQDRCFLVEGYTDVISMHQSGIENVVASSGTALTPGQIRL 299

Query: 304 LFRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSYVRKYGKA 363
           + R TN++   YDGD AG  A+ R ++     L+ G  +K   LPDG+DPDS+ RK+   
Sbjct: 300 IHRFTNNITVLYDGDVAGIKASIRGID---MLLEEGMNIKVCLLPDGDDPDSFARKHNSE 356

Query: 364 DFE 366
           +F+
Sbjct: 357 EFQ 359