Pairwise Alignments

Query, 413 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., Phage integrase from Pseudomonas fluorescens FW300-N2E2

 Score =  444 bits (1143), Expect = e-129
 Identities = 211/397 (53%), Positives = 286/397 (72%)

Query: 1   MAKRVVPLTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISF 60
           M      L++ Q+K  K + K++ LSDGDGLQLRV+ +G+ +W   Y  P+T+ R N++ 
Sbjct: 1   MPTNATRLSDRQLKAVKATGKDFVLSDGDGLQLRVRASGSMMWNFNYREPLTRSRINMAL 60

Query: 61  GCFPDVSLAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRE 120
           G +PD+SLA ARK+  EA+ LLAL IDPK  +DE    + AE E+TF K +  W  LK++
Sbjct: 61  GPYPDLSLANARKKAVEARELLALGIDPKAQRDEVRHAKLAETEHTFEKVATAWFELKKD 120

Query: 121 SVKPETADKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINE 180
           SV     +  +R+L  H+LP +   P+  I    V+ IL P++A+G+LETVKRL + +NE
Sbjct: 121 SVTKAYGEDIWRSLTLHVLPSMKTTPLSQITAPMVIKILRPIEAKGSLETVKRLSQRLNE 180

Query: 181 VMRLAVASGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIANANITLATRCLLE 240
           +M   V SG I  N L  I  +F  PK+++M  + PE LPELM  IANA+I   TRCL+E
Sbjct: 181 IMTYGVNSGLIFANPLNGIRAVFKKPKKENMAALPPEELPELMMEIANASIKRTTRCLIE 240

Query: 241 WQLHTMTRPIESATARWQDIDFKNKVWVIPAERMKMKRPHTIPLTEQTLALLEIMKPISS 300
           WQLHTMTRP E+AT RW DIDF  ++W IP ERMK +RPHTIPLT+Q LALLE +K +S 
Sbjct: 241 WQLHTMTRPAEAATTRWADIDFNKRIWTIPPERMKKRRPHTIPLTDQALALLETLKQLSG 300

Query: 301 HREYIFPSNKNPKSHVNSQSANMALKRMGYKGQLVSHGLRALASTTLNEQGFNPDIIEAA 360
           +REY+FPS++NP++H NSQ+ANMALKRMG++ +LVSHGLR++AST LNE G++P++IE A
Sbjct: 301 NREYVFPSDRNPRTHANSQTANMALKRMGFQDRLVSHGLRSMASTILNEHGWDPELIEVA 360

Query: 361 LAHVDKNEVRKAYNRAEYLEQRRKLMSWWSSHITSAS 397
           LAHVDK+EVR AYNR +Y+E+RR +M+WWS HI  A+
Sbjct: 361 LAHVDKDEVRSAYNRTDYIERRRPMMAWWSEHIQKAA 397