Pairwise Alignments

Query, 413 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., Integrase from Dechlorosoma suillum PS

 Score =  225 bits (573), Expect = 2e-63
 Identities = 127/394 (32%), Positives = 211/394 (53%), Gaps = 9/394 (2%)

Query: 7   PLTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNI-SFGCFPD 65
           PLT+T+V+ AK ++K Y L DG GL L V+ +G K W  +Y + IT +++ I + G +P 
Sbjct: 4   PLTDTKVRNAKPAEKPYKLQDGQGLYLDVRPSGAKFW--RYRYWITPEKDGIYTIGEYPV 61

Query: 66  VSLAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRESVKPE 125
           VSL++AR+ R  A+      I+P   K+ + L+   E  NTF   +  W+   R     +
Sbjct: 62  VSLSDARREREWAREQAKQGINPTHAKEAERLRRMGEHANTFEAVAREWIDQNRNHWTEK 121

Query: 126 TADKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEVMRLA 185
              +  R L   + PK+G +PI+ +    +L I+  V+ +G       + +   ++ R A
Sbjct: 122 YLYQVERFLGNDVFPKIGALPIRMVTSAHLLGIIRTVEERGAKSIAVLIRQWSGQIFRYA 181

Query: 186 VASGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIANANITLATRCLLEWQLHT 245
           VA+   + +  A +         +H   +  + +P ++  +        T    +  L+T
Sbjct: 182 VATLRADSDPSAPLRGAIKKDPVRHNPPLSKDEIPVMLNKLQKYGGYRGTVLATKLMLYT 241

Query: 246 MTRPIESATARWQDIDFKNKVWVIPAERMKMKRP------HTIPLTEQTLALLEIMKPIS 299
             R +E   A W + D +   W +PA+RMKMK+       H +PL+ Q L +L+ +K +S
Sbjct: 242 FVRTVELRKAEWTEFDLEGGEWRVPADRMKMKKQMKVGESHIVPLSRQALEVLKELKTLS 301

Query: 300 SHREYIFPSNKNPKSHVNSQSANMALKRMGYKGQLVSHGLRALASTTLNEQGFNPDIIEA 359
             R+++FP+ + P + + + + N AL+RMGY G+   HG RA AST L+E G+N   IE 
Sbjct: 302 GGRKFLFPNLRTPDTCMTATTINKALERMGYAGKFSGHGFRATASTMLHELGWNEKAIER 361

Query: 360 ALAHVDKNEVRKAYNRAEYLEQRRKLMSWWSSHI 393
            LAH ++N+V+ AYN AEYL +RR++M  WS  I
Sbjct: 362 QLAHAERNKVKAAYNHAEYLPERREMMQAWSDWI 395