Pairwise Alignments

Query, 413 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., hypothetical protein from Klebsiella michiganensis M5al

 Score =  152 bits (383), Expect = 2e-41
 Identities = 113/403 (28%), Positives = 186/403 (46%), Gaps = 19/403 (4%)

Query: 8   LTNTQVKQAKESDKEYTLSDGDGLQLRVK--TNGTKLWILKYTHPITKKRNNISFGCFPD 65
           LT+T+ +  K  DK        GL L       G   WI +Y  P+T+KR   S G +P+
Sbjct: 4   LTDTKARHIKPGDKALPHGGVIGLTLNPTRANKGRGYWIFRYVSPVTQKRRQASLGTYPE 63

Query: 66  VSLAEARKRRSEAKTLLALNIDPKQHK--DEQLLKERAELENTFGKYSDRWLTLKRESVK 123
           +S+AE  K  S  +  LA NIDP + K   +Q  K +A +            TL      
Sbjct: 64  ISIAEVGKIASAMREQLAKNIDPLEEKSIQQQNEKRKASIPTFQSAAETLHPTLLPGWKN 123

Query: 124 PETADKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEVMR 183
            +   +    L+ H  P LG   +  I    +  IL P+       T KR+ + I  VM 
Sbjct: 124 IKHGKQWITTLQTHAFPILGVKTLDTINAADIAEILSPIWLSHP-ATAKRVKQRIYTVME 182

Query: 184 LAVASGDIEVNYLADITKLFP-----APKRQHMVTIEPERLPELM-QAIANANITLATRC 237
             +A G  ++N +  +  L P     A + +H   +  + +P      + + N    +R 
Sbjct: 183 WGLAQGYCKINPVDVVAHLLPQQNKLATRARHFPAMPWKAIPLFFANHLHSDNAYDVSRA 242

Query: 238 LLEWQLHTMTRPIESATARWQDIDFKNKVWVIPAERMKMKRPHTIPLTEQTLALLEIMKP 297
           LL   + T  R  E    RW +I+ K ++W IP E+MK    H +PLT Q + +  I+K 
Sbjct: 243 LLAIVILTACRSGEVRAMRWCEINEKQQIWTIPPEKMKGGIQHRVPLTNQAIKI--ILKM 300

Query: 298 ISSHREYIFPSNKNPKSHVNSQSANMALKRMGYKGQL-----VSHGLRALASTTLNEQGF 352
              H++ +FPS +  ++ ++  +    L+R+     +      +HG R+      +E G+
Sbjct: 301 KGRHKDLVFPSVRK-QTVLSDMALTSFLRRVEASSDIPDRVATAHGFRSSFRDWCSEHGY 359

Query: 353 NPDIIEAALAHVDKNEVRKAYNRAEYLEQRRKLMSWWSSHITS 395
           + D+ E ALAH  +++V  AY+R + LEQRR +M  W+ ++ S
Sbjct: 360 SRDLAERALAHAIQSKVEAAYHRTDLLEQRRPMMQAWADYVFS 402