Pairwise Alignments

Query, 413 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., Prophage integrase IntA from Enterobacter sp. TBS_079

 Score =  224 bits (570), Expect = 5e-63
 Identities = 133/402 (33%), Positives = 221/402 (54%), Gaps = 20/402 (4%)

Query: 8   LTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGCFPDVS 67
           L++ +V+ AK   K Y L+DG+G+ L V  NG+K W L+Y      K   ++ G +P+VS
Sbjct: 3   LSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYR--FGGKEKMLALGKYPEVS 60

Query: 68  LAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRESVKPETA 127
           LA+AR RR EA+ LLA  +DP ++K    +++  E   TF   +  W    ++     +A
Sbjct: 61  LADARARRDEARKLLANGVDPSENKKAVKVEQEQEAI-TFEVVARDWHASNQKWSTSHSA 119

Query: 128 DKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEVMRLAVA 187
            +  ++LE ++   +G   I+DI  R +L  ++ V+  G LE   RL +    +MR AV 
Sbjct: 120 -RVLKSLEDNLFASVGKRNIKDIGTRDLLVPIKAVEKSGRLEVAARLQQRTTAIMRFAVQ 178

Query: 188 SGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIANANITLATRCLLEWQLHTMT 247
           +G I+ N   +I       KR+H   ++  R+PEL+  I N      TR  ++  L    
Sbjct: 179 NGLIDYNPAQEIAGAIATAKRKHRAALDLNRIPELLHRIDNYTGRPLTRLAVDLTLLVFI 238

Query: 248 RPIESATARWQDIDFKNKVWVIPAER------------MKMKRPHTIPLTEQTLALLEIM 295
           R  E   ARW ++DF+  +W IP ER             KM+ PH +PL+ Q LA+LE +
Sbjct: 239 RSSELRFARWTEVDFETAMWTIPGEREPLEGVKHSQRGSKMRTPHLVPLSRQALAILEKI 298

Query: 296 KPISSHREYIFPSNKNPKSHVNSQSANMALKRMGY--KGQLVSHGLRALASTTLNEQG-F 352
           K ++ +RE IF  + +P+  ++  + N AL+ MGY  K ++  HG R +A ++L E G +
Sbjct: 299 KSMNGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKKEVCGHGFRTMACSSLIESGLW 358

Query: 353 NPDIIEAALAHVDKNEVRKAY-NRAEYLEQRRKLMSWWSSHI 393
           + D +E  ++H +++ VR AY ++AE+L +RR ++ WW+  +
Sbjct: 359 SRDAVERQMSHQERSSVRAAYIHKAEHLGERRLMLQWWADFL 400