Pairwise Alignments

Query, 413 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., Prophage integrase IntS from Enterobacter sp. TBS_079

 Score =  199 bits (507), Expect = 1e-55
 Identities = 126/402 (31%), Positives = 206/402 (51%), Gaps = 21/402 (5%)

Query: 8   LTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGCFPDVS 67
           LT+ +++ AK  +K Y L+D   + L V  NG++ W L+Y      K   ++ G +PDVS
Sbjct: 3   LTDAKIRAAKPDEKPYKLADSGNMFLLVHPNGSRYWRLRYR--FLGKEKTLALGVYPDVS 60

Query: 68  LAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRESVKPETA 127
           L+EAR++R  A+  +A   DP + K  ++ K   +   TF   + +W    ++      +
Sbjct: 61  LSEAREKRDAARKQIAEGTDPCEQK--RIKKSVPDTAQTFEGIARQWHKSNKKW-SASHS 117

Query: 128 DKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEVMRLAVA 187
           +K  ++LE H+ P +G+  I  +K   +L  ++  +A+   E   RL + I  +MR A  
Sbjct: 118 EKILKSLETHVFPFIGSRDITALKTPDLLIPVKAAEAKEIYEIAARLQQRITAIMRYAAQ 177

Query: 188 SGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIANANITLATRCLLEWQLHTMT 247
           SG I  N   D+       KRQH   +   R+ EL+  +        TR   +  L    
Sbjct: 178 SGIISYNPAVDMAGALTTVKRQHRPALALNRISELLGRLDAYRGQPLTRLATKLTLLIFI 237

Query: 248 RPIESATARWQDIDFKNKVWVIPAER------------MKMKRPHTIPLTEQTLALLEIM 295
           R  E   ARW +IDFK  +W IP ER             KM+  H +PL+ Q L +L+ +
Sbjct: 238 RSSELRFARWSEIDFKKAMWTIPPERKPIDGVKYSHRGSKMRTEHLVPLSIQALDILQQI 297

Query: 296 KPISSHREYIFPSNKNPKSHVNSQSANMALKRMGY--KGQLVSHGLRALASTTLNEQG-F 352
             IS   E IF  + NP   ++  + N AL+ MGY  K  +  HG RA+A ++L E G +
Sbjct: 298 HNISGEHELIFTGDHNPWKPMSENTVNNALRLMGYDTKVDVCGHGFRAMACSSLIESGLW 357

Query: 353 NPDIIEAALAHVDKNEVRKAY-NRAEYLEQRRKLMSWWSSHI 393
           + D +E  ++H ++N VR AY ++AE+L++RR ++ WW+  +
Sbjct: 358 SRDAVERQMSHQERNGVRAAYIHKAEFLDERRLMLQWWADFL 399