Pairwise Alignments

Query, 413 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., phage integrase family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  414 bits (1064), Expect = e-120
 Identities = 196/396 (49%), Positives = 281/396 (70%)

Query: 1   MAKRVVPLTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISF 60
           M +   PL +T+V+QAK  +KEY LSDG+GL LRV+  G+K W+L Y+ P ++KR N++ 
Sbjct: 1   MPRMAKPLNDTEVRQAKPREKEYNLSDGNGLMLRVRPIGSKTWLLNYSRPTSRKRANLTL 60

Query: 61  GCFPDVSLAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRE 120
           G +P+++LA+AR++  +A+ L+A +IDP++H++ Q     A  E+TF   + +W  +K+ 
Sbjct: 61  GTYPELTLADARRKALDARKLIAQDIDPQEHREGQRQALAAIHEHTFENVATQWFDIKKT 120

Query: 121 SVKPETADKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINE 180
            +    A   +R+ + H+LP +G+ PI  I    V+ I  P++A+G+LETVKRL + +NE
Sbjct: 121 EITENHAASTWRSFKLHVLPYIGSTPISQITAPMVIEIFRPIEAKGSLETVKRLTQRLNE 180

Query: 181 VMRLAVASGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIANANITLATRCLLE 240
           VM  AV +G I  N L+ I   F  PK+Q M  + P  LPEL+  ++ A+I   TR L+E
Sbjct: 181 VMTYAVNTGLIHANPLSGIKAAFKKPKKQKMAAMAPYELPELLSTLSRASIKRVTRLLIE 240

Query: 241 WQLHTMTRPIESATARWQDIDFKNKVWVIPAERMKMKRPHTIPLTEQTLALLEIMKPISS 300
           WQLHTMTRP E+A ARW + +F +++W IPAERMKMKR H IPL++  + +L+ +K IS 
Sbjct: 241 WQLHTMTRPNEAAGARWDEFNFDDRLWTIPAERMKMKREHVIPLSDACMLILQELKSISG 300

Query: 301 HREYIFPSNKNPKSHVNSQSANMALKRMGYKGQLVSHGLRALASTTLNEQGFNPDIIEAA 360
           HREY+FP+++NPK+H N Q+AN ALKRMG + +  +HGLRALASTTLNEQGF+ D++EAA
Sbjct: 301 HREYLFPADRNPKTHSNVQTANAALKRMGLQDRTTAHGLRALASTTLNEQGFDWDVVEAA 360

Query: 361 LAHVDKNEVRKAYNRAEYLEQRRKLMSWWSSHITSA 396
           LAH DKN+VR AYNRA YLE+RR++M WWS  I SA
Sbjct: 361 LAHTDKNQVRSAYNRATYLERRREMMEWWSKSIKSA 396