Pairwise Alignments

Query, 410 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., putative signal transduction protein containing EAL and modified HD-GYP domains from Dechlorosoma suillum PS

 Score =  145 bits (365), Expect = 3e-39
 Identities = 112/371 (30%), Positives = 181/371 (48%), Gaps = 10/371 (2%)

Query: 4   FIAKQAITDENLTIVGYELLFRNSEKNRYPEGVSESLATKKIIWQQFVDDTIDRVVESDK 63
           ++ +Q I D   ++ GYELLFR+          +  +AT  +I   F +  +   +   K
Sbjct: 12  YLGRQPILDARQSLYGYELLFRSGPAPNRAIVANHMVATATVITHAFTELGLADALGEQK 71

Query: 64  LCFINFPEDLLIDGYAEILPKDKVVIEVLENTIPTEKLLSVIRGLREKGYLFALDDVTRT 123
             FIN   D L+    E+LPKDKVV+E+LE    T +LL   R L+ KG+  ALDD+   
Sbjct: 72  -AFINVDGDFLLSEAVELLPKDKVVLEILETVEVTPELLKRCRELKAKGFTLALDDIV-A 129

Query: 124 VFENWHDYLSLFDFVKIDTRRIDDDFLK-LFFSLKPICCIALAEKVETNEQLESLKKNGF 182
           V       L L D  K+    + ++ L  L  +L       LAE+VE+ EQ+E  +  GF
Sbjct: 130 VTPAMEPLLDLMDIAKVCISAVSEEALPGLVQALARRPLELLAEQVESREQMEHCRNLGF 189

Query: 183 LLFQGFYLDRPKVLRCATTEYANTESFELLIEVIKRDFNPSRLELILIRNPKLTVGLLKY 242
            LFQG+Y   P +L       +     +LL +V+  D +  +LE      P L++ LL+ 
Sbjct: 190 HLFQGYYFAHPTILSGRKLGQSRLSLLKLLSQVLD-DSDTPQLEQTFKHEPGLSINLLRM 248

Query: 243 VNTIGKPLKP-ISSIQHAIVYLGLEQLRMFVFLLCSSTIHDKLDLDKYVYV-LTRAKFCE 300
            N+     +  I+S++HAI  LG  QL+ ++ LL  +           + +  TRA+  E
Sbjct: 249 ANSAAVGARTRITSLRHAITLLGRRQLQRWLQLLLYTDPAGNTGFPPLLQLAATRARLLE 308

Query: 301 LMMGE---IDHKLSSMAFISGMLSLSHLFLPNDNSELLSSL-PISNDMRDAVLCRAGILG 356
           L+       D   +  AF++G+LSL+         E+LS +  ++ D++ A+L   G LG
Sbjct: 309 LLAESHMAADRDFADRAFMTGILSLTPALFATPIDEILSQISTLATDVKQALLRHQGSLG 368

Query: 357 DVISASEAYQN 367
            ++   EA ++
Sbjct: 369 LLLRLIEALES 379