Pairwise Alignments

Query, 410 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 487 a.a., diguanylate phosphodiesterase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  141 bits (355), Expect = 5e-38
 Identities = 125/435 (28%), Positives = 193/435 (44%), Gaps = 51/435 (11%)

Query: 5   IAKQAITDENLTIVGYELLFRNSEKNRYPEG-VSESLATKKIIWQQFVDDTIDRVVESDK 63
           +A+Q + D +  + GYELLFR+ +      G V  S+AT  +I   F       V+   +
Sbjct: 58  VARQPVFDASGEVWGYELLFRHPDSPECCSGDVDASVATASVIADGFA--MARPVLGQGQ 115

Query: 64  LCFINFPEDLLIDGYAEILPKDKVVIEVLENTIPTEKLLSVIRGLREKGYLFALDDVTRT 123
              +NF ED+L++G   ILP D   +EVLE    TE +L  +  L+ +GYL  +DD    
Sbjct: 116 RLLVNFAEDMLLEGTPRILPPDVCGVEVLETVPVTEAVLLALSALKSEGYLIVVDDYAGQ 175

Query: 124 VFENWHDYLSLFDFVKIDT-RRIDDDFLKLFFSLKPICCIALAEKVE---TNEQLESLKK 179
                   L L D VKID   R   D  +    L+   C  LAEKVE   T+ Q E+L  
Sbjct: 176 --PGMEALLDLADIVKIDVLGRPLADLARDVAGLRSRQCQLLAEKVEDLATHRQCEAL-- 231

Query: 180 NGFLLFQGFYLDRPKVLRCATTEYANTESFELLIEVIKRDFNPSRLELILIRNPKLTVGL 239
            GF LFQGF+  RP+++     + +      LL  + + D N      ++  +  L+  L
Sbjct: 232 -GFSLFQGFFFSRPELVHGRRLDSSQAAKMRLLATLAREDVNIKAATEVVRSDAALSYKL 290

Query: 240 LKYVNTI--GKPLKPISSIQHAIVYLGLEQLRMFVFLLCSSTIHD----KLDLDKYVYVL 293
           L+Y+N++  G P+K ++SIQH I  LG   L   V  LC + + +     +  +      
Sbjct: 291 LRYINSVHFGLPVK-VTSIQHGISLLGTRNL---VQWLCVTVLSEFDTGPMARELIAVSA 346

Query: 294 TRAKFCELMMGEIDHKLSSM----------------------------AFISGMLSLSHL 325
            RAKF EL    +  +   M                             F+ G+ SL   
Sbjct: 347 LRAKFLELCSSRVTLRARQMDTGHMEAGQVGTGQVGTGQARPAPQSGAMFMLGLFSLLEP 406

Query: 326 FLPNDNSELLSSLPISNDMRDAVLCRAGILGDVISASEAYQNAKWCEALDFLNKYKIKID 385
            L    +ELL SLP+++++ +A+    G     +   E Y+  +W E L       +   
Sbjct: 407 LLCLPLAELLRSLPLADELTEALAAHTGPYAPWLELLEHYERGRWDEVLASGEAMGL-TQ 465

Query: 386 GGLSKLYMDAIEWSS 400
             L+  Y  A+EWS+
Sbjct: 466 ADLAMAYAGALEWSA 480