Pairwise Alignments

Query, 410 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., SEED: Predicted signal transduction protein from Desulfovibrio vulgaris Hildenborough JW710

 Score =  112 bits (279), Expect = 2e-29
 Identities = 84/277 (30%), Positives = 136/277 (49%), Gaps = 7/277 (2%)

Query: 4   FIAKQAITDENLTIVGYELLFRNSEKNRYPEGVSESLATKKIIWQQFVDDTIDRVVESDK 63
           FIA+Q + D  + + G+ELLFR+SE+ R+        AT  +I   F    ++ ++    
Sbjct: 12  FIARQPVFDGRMNLWGHELLFRDSEEARHARIDDPDRATASVIADGFAL-ALEAMLPGQY 70

Query: 64  LCFINFPEDLLIDGYAEILPKDKVVIEVLENTIPTEKLLSVIRGLREKGYLFALDDVTRT 123
           +  +N P+ LL + Y   LP +  + E+LE   PT ++L  ++ L+ +GY  ALDD    
Sbjct: 71  M-LVNMPQGLLEEEYVTALPAEVCIPEILETVHPTPEVLERLQLLKARGYTLALDDFVGQ 129

Query: 124 VFENWHDYLSLFDFVKIDTRRI-DDDFLKLFFSLKPICCIALAEKVETNEQLESLKKNGF 182
                   L L D +K+D   +  DD   L  SL       LAEKVE N         GF
Sbjct: 130 --PGNEALLELADIIKVDVLAVPPDDLPALVASLHRRGAQLLAEKVEDNAMFHRCLDLGF 187

Query: 183 LLFQGFYLDRPKVLRCATTEYANTESFELLIEVIKRDFNPSRLELILIRNPKLTVGLLKY 242
            LFQGF+  RP+V+       A +    LL + +     P +L   +  +P L+  LL++
Sbjct: 188 TLFQGFFFARPEVVPGRKPSVAQSTLVRLLPQ-LSGPAEPRKLGRTIGTDPGLSYRLLRH 246

Query: 243 VNTIGKPL-KPISSIQHAIVYLGLEQLRMFVFLLCSS 278
           +N+    L + +SS++HA++ LG    R ++  +  S
Sbjct: 247 INSAWYGLTRTVSSVEHAVLLLGERPTRTWLLAVLLS 283