Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  223 bits (569), Expect = 1e-62
 Identities = 160/479 (33%), Positives = 252/479 (52%), Gaps = 40/479 (8%)

Query: 183 KNVDDINLFEAGYVF-ITSNTGKVIIHSNTDELGKNVKDIY--NGFRLDKGKVVLSVNGV 239
           K + +I+  + GY F   S T ++   ++ D +GK+ KD    NG  +++  V ++ +G 
Sbjct: 86  KLLSNISYGKDGYFFGYDSETIRLFKANSPDGVGKSFKDNRDPNGVYVNRDLVKVAKDGT 145

Query: 240 NKWLYTSPILGGDWFIIAV------------IDESIAMQSINKM----------KYELIF 277
           +   Y+SP+ G    +  +            +  S+ +  I             + + + 
Sbjct: 146 HYLEYSSPLPGSQDLVPKLGYTEYLSKWDLAVGSSVNLDGIEAQVALVEAKVHDRVQGVI 205

Query: 278 YSAIGLVFGGLILVFILRRLMS-----PLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSE 332
            S +G+    L+++ ++  L++     PL  +   + DIA+G GDLT++L      E  +
Sbjct: 206 LSIVGIAAVVLLVIAVVGLLLANAILRPLHLMKDNLDDIAAGEGDLTRRLTITSQDELGQ 265

Query: 333 LALGFNSFTEMLGSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNE 392
           LA  FN F + +   +RQ+  + S +     + + +A+ S   +E+Q  E +Q+ATA+NE
Sbjct: 266 LAGSFNRFVDKIHGLVRQITDMTSQLTGLVTQVSEQAQRSEQAMERQRHETDQVATAINE 325

Query: 393 MAMTASEVANSAQVAADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKA 452
           M+  A EVA SAQ AA AA++ +        VV  +   I  L   I SS   +  L + 
Sbjct: 326 MSSAAQEVARSAQGAAVAAQQTDEEGQSAKRVVAGSIQQIHALVNDIRSSGVSLDSLQQD 385

Query: 453 TDRIETVLDVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQI 512
              I +VL VI  IA+QTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQQST +I
Sbjct: 386 VASIVSVLGVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQSTQEI 445

Query: 513 SEIIEQLQEGAKNVSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAA 572
             +I++LQ G      +M  S    D   E+ N+    +  + Q I  I+ MN QIASAA
Sbjct: 446 QGMIDRLQSGTHAAVEAMRRSSEAGDGTSERANEAGASLDTMAQLIGTINSMNAQIASAA 505

Query: 573 EEQSLVAEEINNNTVNIKDLSIKLSEAASNAGTEMNAQVSKV-----KEQNELLNEFKI 626
           EEQ+ VAEEIN    ++  +++ +   A    T++ AQ S+      +   +L+ +F+I
Sbjct: 506 EEQTAVAEEINR---SVHQIAVAVDSVADE--TQLGAQTSRSLADLGQRLGKLVGQFRI 559