Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N2E2

 Score =  291 bits (745), Expect = 6e-83
 Identities = 190/635 (29%), Positives = 334/635 (52%), Gaps = 18/635 (2%)

Query: 1   MNVGFVKKLIFISSFILLVTVA-FVVWEGYTTAKKEVSVVIEDGINEIINKTERFVSLKL 59
           MN+ F  K++  +S ++++  A F ++  Y          I   +   I ++    +  +
Sbjct: 1   MNLKFSHKILLAASGVVVLAFALFTLYNDYLQRN-----TIGSSLESSIEQSGDLTASSI 55

Query: 60  ESDISLASSIVDSISLRISDEQYINDIINGNAIKKAFLSTGFGFDSNGK---VIENDPNW 116
           ++ +S    ++++++  I+ +    D+     + +  L++ F F   G+   V    P+ 
Sbjct: 56  QNWMSGRILVLENLAQNIAHQGTAADL--PGLVDQPALTSNFQFTYVGQANGVFTQRPDA 113

Query: 117 EPEDDYDPRSRGWYQEAKKNKRIFITEPYLDTEGKNFLVSISSPVADTMNNFIGAMYFDV 176
           +  D YDPR R WY++A    +  +T PYL   G   +V+++ PV       +G +  D+
Sbjct: 114 KMPDGYDPRQRPWYKQAVTADKTMLTPPYLAAVG-GLVVTVALPVKHN-GELLGVVGGDL 171

Query: 177 DLSRIQKNVDDINLFEAGYVFITSNTGKVIIHSNTDELGKNVKDIYNG--FRLDKGKVVL 234
            L  + K ++ ++    G+ F+ S  G+VI+  + D++ KN+KDIY G   R+ KG   +
Sbjct: 172 SLETLVKIINSVDFGGIGHAFLVSGDGQVIVSPDKDQVMKNLKDIYPGTPVRIGKGIQDV 231

Query: 235 SVNGVNKWLYTSPILG---GDWFIIAVIDESIAMQSINKMKYELIFYSAIGLVFGGLILV 291
            +NG ++ L  +P+ G    +W+I   ID++ A   +++ +   +    + +    L+L 
Sbjct: 232 ELNGQDRILSFTPVTGLPNAEWYIGLSIDKAKAYAPLSQFRTSALIAMFVAVAAIALLLS 291

Query: 292 FILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQIRQL 351
            +++ LM PL T+  A++DIA G GDLT++L      EF+ L   FN F E + + I ++
Sbjct: 292 LLIQVLMRPLTTMGRAMQDIAQGEGDLTRRLVVQGKDEFAVLGGSFNQFVERIHASISEV 351

Query: 352 KTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAADAA 411
            +    V D +++    +  S +  ++Q      +A A+N++     E+A +A  A+  A
Sbjct: 352 SSATRQVHDLSQRVMTSSNASLVGSDEQSARTNSVAAAINQLGAATQEIARNAADASQHA 411

Query: 412 KEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIADQTN 471
                 + +G  VV +T  A+  LS +I  S   ++ L  +TD I  +LDVI  I+ QTN
Sbjct: 412 SGASEQADDGRQVVEKTIQAMTELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTN 471

Query: 472 LLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSRSMD 531
           LLALNAAIEAARAGE+GRGFAVVADEVR LA RTQ+S  +I ++I  LQ G++    +M+
Sbjct: 472 LLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMN 531

Query: 532 ESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVNIKD 591
            S+  ++  VE  NQ   ++  V Q I  I  MN  +A+A EEQ+ V E +N +  +I  
Sbjct: 532 ASQTSSEESVEVANQAGLRLVSVTQRIGEIDGMNQSVAAATEEQTAVVETLNMDVSHINL 591

Query: 592 LSIKLSEAASNAGTEMNAQVSKVKEQNELLNEFKI 626
           L+ +     +    + +A   +     +L++ FKI
Sbjct: 592 LNQQSVANLNETLKDCDALSQQANRLKQLVDSFKI 626