Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  271 bits (694), Expect = 5e-77
 Identities = 179/530 (33%), Positives = 289/530 (54%), Gaps = 29/530 (5%)

Query: 125 RSRGWYQEAKKNKRIFITEP--YLDTEGKNFLVSISSPVADTMNNFIGAMYFDVDLSRIQ 182
           R+  +Y  ++ +K+  + +P  Y        L S   P+      F G +  D+ ++ IQ
Sbjct: 184 RASEYYLCSQDSKKACVIDPAPYRVGSTMTMLASFIEPIMID-GQFQGIVGADLSVNFIQ 242

Query: 183 KNV--DDINLFEAG--YVFITSNTGKVIIHSNTDELGKNVKDIYNGFRLDK------GKV 232
             +   D  L++       ++SN   V    +  +LG+   D+ +   LD       G+V
Sbjct: 243 DMLVAADGKLYDGAGEMALLSSNNRLVAFTKDPSKLGEKASDLLDASALDNLAKLGDGEV 302

Query: 233 VLSVNGVNKWLYTSPILG-----GDWFIIAVIDESIAMQSINKMKYEL-------IFYSA 280
              ++  +  +      G       W ++  +  +  M  +  ++ +L       IF  A
Sbjct: 303 RYDIDEAHGHIEVYMPFGIGETNARWTLMLQLPLNAVMADLQALQKDLDHQRQADIFGMA 362

Query: 281 I-GLVFGG---LILVFILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALG 336
           I GLV  G   L++  +   +  PLK + + + DIA G GDLT++L ++   E   +A G
Sbjct: 363 IVGLVIAGIGLLVIWLVGHGIARPLKQMVAMLDDIAQGEGDLTRRLVSDRADELGAIARG 422

Query: 337 FNSFTEMLGSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMT 396
           FN+F   L   I Q+ T    V D +E TA+ A  +   V +Q+ E++Q+ATA++EM  T
Sbjct: 423 FNTFLSKLQGMITQVVTSVQSVSDSSEHTADIAIRTNQGVHKQMSEIDQVATAVHEMTAT 482

Query: 397 ASEVANSAQVAADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRI 456
           A +VA +A  AA AA   + A+ +G  +V +T+ +I  L++ IG +V  V+ L K ++ I
Sbjct: 483 AQDVARNATQAAQAASHADQAASQGMQIVRDTSTSIGALAVEIGKAVGVVQTLAKDSENI 542

Query: 457 ETVLDVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEII 516
             +L  I  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LAQ+TQQ+T +I  +I
Sbjct: 543 NAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATEEIQTMI 602

Query: 517 EQLQEGAKNVSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQS 576
           +QLQ+G ++V R M++S+  TD  V+   +  + +  + QA+  I+DMN QIASAAEEQS
Sbjct: 603 QQLQQGTRDVVRVMEDSQTRTDESVQHAAKAAQALETITQAVSVINDMNTQIASAAEEQS 662

Query: 577 LVAEEINNNTVNIKDLSIKLSEAASNAGTEMNAQVSKVKEQNELLNEFKI 626
            VA++IN N +NI  ++ +++  A  +           ++Q  L+N+F++
Sbjct: 663 AVADDINRNVINIGQVANEVASGADESSAASAGLTKLAEQQRRLINQFRV 712