Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  240 bits (612), Expect = 2e-67
 Identities = 166/520 (31%), Positives = 259/520 (49%), Gaps = 16/520 (3%)

Query: 95  AFLSTGFGFDSNGKVIENDPNWEPEDDYDPRSRGWYQEAKKNKRIFI-TEPYLDTEGKNF 153
           A+LS G   D       +DP      +YDPR R WY+ A       + T+ Y        
Sbjct: 114 AYLSVGME-DGGYASWPDDPKMA---NYDPRVRPWYKAAMAAPGTNVRTDAYYWAPDDVS 169

Query: 154 LVSISSPVADTMNNFIGAMYFDVDLSRIQKNVDDINLFEAGYVFITSNTGKVIIH----- 208
           L+     VAD     IG +  DV L ++ + V +I L E+GY+ +    G V++      
Sbjct: 170 LIGTVHTVADASGKPIGVVGLDVSLKQLTELVKNIKLGESGYLMLVEANGNVLVDPADAK 229

Query: 209 ---SNTDELGKNVKDIYNGFRLDKGKVVLSVNGVNKWLYTSPILGGDWFIIAVIDESIAM 265
                  +LG N  ++        G   + ++GV          G  W  I +I     M
Sbjct: 230 HNFKPLADLGPNYAELAKS---SDGVTQIEIDGVPYMANVVSSKGLGWRFIGLIKRDEVM 286

Query: 266 QSINKMKYELIFYSAIGLVFGGLILVFILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTN 325
              + + + +   +A+  V   L+       ++ P++ + + +++IA G GDLT+KL   
Sbjct: 287 AEASSLTWLIAAIAAVLAVVFALVGASFASVIVRPIRGVANGLQEIAEGEGDLTRKLTVQ 346

Query: 326 LDKEFSELALGFNSFTEMLGSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQ 385
              E + LA  FN F  M+   ++++ + +S +   A  T++ A+       +Q Q +E 
Sbjct: 347 GKDETATLAGWFNQFLGMIAQLMQRIGSASSDLQTAAADTSHVAQNMNDAAGRQRQAVEL 406

Query: 386 LATAMNEMAMTASEVANSAQVAADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVED 445
           ++TA NEM  TA+EVA S   AA +A EG     +G   + E T ++ +LS  +  S + 
Sbjct: 407 VSTAFNEMVATANEVARSCSQAASSADEGYRDVHDGQHHIGEATGSVMKLSDDLQKSTQT 466

Query: 446 VKELVKATDRIETVLDVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRT 505
           ++ L + +  I T+LD I  IA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA+RT
Sbjct: 467 MQALEQDSKNINTILDTIRSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALARRT 526

Query: 506 QQSTMQISEIIEQLQEGAKNVSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMN 565
             ST +I  ++  L    + V++ M  S   +   VE+  Q  +    ++ ++  I D N
Sbjct: 527 ADSTGEIDSLLGNLARRTQEVTQQMQSSLQVSQTSVERIQQARDSFDKIRNSVDSIRDQN 586

Query: 566 LQIASAAEEQSLVAEEINNNTVNIKDLSIKLSEAASNAGT 605
            QIA+AAEEQ  VAE+IN +   I   +  + E A +A T
Sbjct: 587 TQIATAAEEQHQVAEDINRHIAQIHADAQLVEEFAHSAQT 626