Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., Aerotaxis receptor Aer from Pseudomonas fluorescens FW300-N2E2

 Score =  208 bits (529), Expect = 5e-58
 Identities = 143/400 (35%), Positives = 218/400 (54%), Gaps = 13/400 (3%)

Query: 226 RLDKGKVVLSVNGVNKWLYTSPILGGDWFIIAVIDE-SIAMQSINKMKYELIFYSAIGLV 284
           R+++GK   +V G +KW+   P+L  DW    ++ + S  + +     +     + + + 
Sbjct: 132 RINQGKS--AVPGSDKWV---PMLQ-DWLPFILVSQLSFVVGAFLDSSWGFALAAVLSVP 185

Query: 285 FGGLILVFILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEML 344
            G + L +  R +   L+  +    D       L  ++ T+     + L +   S    L
Sbjct: 186 LGLMGLQWQQRGIKRLLRLAEQTTSD------PLIARMYTDSRGVQARLEMSILSQEARL 239

Query: 345 GSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSA 404
            + + +L+  A  + D A ++   A  S   +E+Q  E EQ+ATA+N+MA T  EVA+  
Sbjct: 240 KTCLTRLQDTAEHLNDQARQSNTLAHNSSSGLERQRVETEQVATAVNQMAATTQEVASHV 299

Query: 405 QVAADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVIN 464
           Q  ADA +E    +  G  +  ET +AI+RLS+ +G + + V +L K +D I  V+DVI 
Sbjct: 300 QRTADATQEANRLTSRGRDIAGETREAIERLSVVVGETGQTVTQLAKDSDEIGGVVDVIK 359

Query: 465 DIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAK 524
            IADQTNLLALNAAIEAARAGE GRGFAVVADEVR LAQRT +ST QI  +I +LQ+ A 
Sbjct: 360 GIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTSESTGQIHALIAKLQQTAT 419

Query: 525 NVSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINN 584
           N  ++MD    + +  V +  + +E +  + +A+  I+DM  QIA+A EEQS VAEEI+ 
Sbjct: 420 NAVQTMDAGHRQAEEGVARVMEADEALVGISEAVAHITDMTTQIAAATEEQSSVAEEISR 479

Query: 585 NTVNIKDLSIKLSEAASNAGTEMNAQVSKVKEQNELLNEF 624
           N  NI +L+ + S  A ++             Q  L+  F
Sbjct: 480 NISNISELADQTSGQAHSSALLSEELTRTANTQYSLVERF 519