Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 612 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  241 bits (616), Expect = 5e-68
 Identities = 170/525 (32%), Positives = 269/525 (51%), Gaps = 31/525 (5%)

Query: 121 DYDPRSRGWYQEAKKNKRIFITEPYLDTE---GKNFLVSISSPVADTMNNFI--GAMYFD 175
           +YDPRSR WY+ A  +    +  P        GK     + +  A   ++ I  G +  +
Sbjct: 98  NYDPRSRPWYKAAMASPGKTVRTPAFYPAYDYGKEDAALVGTARAMITSDGIVKGVLAVN 157

Query: 176 VDLSRIQKNVDDINLFEAGYVFITSNTGKVIIHSNTDELGKNVKDIYNGFR----LDKGK 231
           V L  + + V  I L E+GYV +  +   ++   +T    K +KD+   +     + +G 
Sbjct: 158 VSLKNLTELVKSIKLGESGYVMLIEDGIVLVDPRDTTHSFKPLKDLGAAYAKLATIPQGS 217

Query: 232 VVLSVNGV----NKWLYTSPILGGDWFIIAVIDESIAMQSINKMKYELIFYSAIGLVFGG 287
             + +NG+    N W  TSP LG  W  I +I+ S  M +  +M Y         L+ GG
Sbjct: 218 TEVELNGIPYMANVW--TSPDLG--WRYIGLIERSEVMSAATRMTY------LTTLIVGG 267

Query: 288 LILVFIL------RRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFT 341
           L ++F L      + ++ P+  + + ++ IA G GDL ++L+   + E +ELA  FN F 
Sbjct: 268 LTVIFALVAVAFSKSIVKPISQVSTGLQSIAQGEGDLRRELEFQGNDETAELAGWFNKFL 327

Query: 342 EMLGSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVA 401
             +   I+ +   +S + + +   +  A        +Q + +E ++TA NEM  TA+EVA
Sbjct: 328 SAIRQLIQHIGAASSNLQNASRVNSEVANNMNEAAGRQREAVELVSTAFNEMVATANEVA 387

Query: 402 NSAQVAADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLD 461
            S   AA++A+ G     EG   +  TTD + RL  R+  S + + EL   +  I  +L 
Sbjct: 388 RSCSGAAESAENGHRRVAEGKQQIEITTDNVNRLGRRLTESSQSMTELEAGSRSINQILG 447

Query: 462 VINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQE 521
            I  IA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA+RT  ST +I +++  L  
Sbjct: 448 TIRAIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALAKRTSDSTGEIEQLLGALGS 507

Query: 522 GAKNVSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEE 581
             + V   M      +   V       +    +Q +++ I D NLQI++AAEEQ  VAEE
Sbjct: 508 KTQEVMGKMGSCLELSHASVSSIESTRDSFEGIQLSVNEIRDQNLQISAAAEEQHSVAEE 567

Query: 582 INNNTVNIKDLSIKLSEAASNAGTEMNAQVSKVKEQ-NELLNEFK 625
           IN +   I D   +L E+ +N+  + + ++S + ++ N L+  FK
Sbjct: 568 INRHIQQIYD-EARLVESLANSAQDDSGKLSSLSDELNGLVGRFK 611