Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  241 bits (616), Expect = 5e-68
 Identities = 180/596 (30%), Positives = 285/596 (47%), Gaps = 19/596 (3%)

Query: 42  DGIN---EIINKTERFVSLKLESDISLASSIVDSISLRISDEQYINDIINGNAIKKAFLS 98
           DGI+   E I K  R ++ K   + SLA +    +         I D    +    A+LS
Sbjct: 58  DGISQNVEYIAKDPRIIAAKGLKNYSLADAAQTPLPEINQQLLEIFDRFAKSHPTTAYLS 117

Query: 99  TGFGFDSNGKVIENDPNWEPEDDYDPRSRGWYQEAKKNKRIFI-TEPYLDTEGKNFLVSI 157
            G   D       +DP      +YDPR R WY+ A       + T+ Y        L+  
Sbjct: 118 VGLS-DGGYASWPDDPKMT---NYDPRVRPWYKAAIAAPGTTVRTDAYYWAPDDVSLIGT 173

Query: 158 SSPVADTMNNFIGAMYFDVDLSRIQKNVDDINLFEAGYVFITSNTGKVIIHSNTD----- 212
              VAD   N +G +  DV L ++ + V +I L ++GY+ +    G V++ +        
Sbjct: 174 VHTVADASGNVVGVVGLDVSLKQLTELVKNIKLGDSGYLMLVEANGNVLVDAADAKHNFK 233

Query: 213 ---ELGKNVKDIYNGFRLDKGKVVLSVNGVNKWLYTSPILGGDWFIIAVIDESIAMQSIN 269
              +LG N  ++        G   + ++GV          G  W  I +I     M   +
Sbjct: 234 PLADLGPNYAELAKS---SDGVTQIEIDGVPYMANVVSSKGLGWRFIGLIKRDEVMAEAS 290

Query: 270 KMKYELIFYSAIGLVFGGLILVFILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKE 329
            + + +   +A   V   ++       ++ P++ + + +++IA G GDLT+KL      E
Sbjct: 291 SLTWLIAAIAAALAVVFAVVGASFASVIVRPIRGVANGLQEIAEGEGDLTRKLSVQGKDE 350

Query: 330 FSELALGFNSFTEMLGSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATA 389
            + LA  FN F  M+   ++++ + +S +   A  T++ A+       +Q Q +E ++TA
Sbjct: 351 TATLAGWFNQFLGMIAQLMQRIGSASSDLQTAAADTSHVAQNMNDAAGRQRQAVELVSTA 410

Query: 390 MNEMAMTASEVANSAQVAADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKEL 449
            NEM  TA+EVA S   AA +A EG     +G   + E T ++ +LS  +  S + ++ L
Sbjct: 411 FNEMVATANEVARSCSQAASSADEGYRDVHDGQHHIGEATGSVLKLSEDLQQSTQTMQAL 470

Query: 450 VKATDRIETVLDVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQST 509
            + +  I T+LD I  IA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA+RT  ST
Sbjct: 471 EQDSKNINTILDTIRSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALARRTADST 530

Query: 510 MQISEIIEQLQEGAKNVSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIA 569
            +I  ++  L    + V++ M  S   +   VE+  Q  +    ++ ++  I D N QIA
Sbjct: 531 GEIDSLLGNLARRTQEVTQQMQSSLQVSHTSVERIQQARDSFDKIRNSVDSIRDQNTQIA 590

Query: 570 SAAEEQSLVAEEINNNTVNIKDLSIKLSEAASNAGTEMNAQVSKVKEQNELLNEFK 625
           +AAEEQ  VAE+IN +   I   +  + E A +A T          +   L+  FK
Sbjct: 591 TAAEEQHQVAEDINRHIAQIHADAQLVEEFAHSAQTGSGRLTDISGQLKGLVGRFK 646