Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  219 bits (559), Expect = 2e-61
 Identities = 141/354 (39%), Positives = 212/354 (59%), Gaps = 17/354 (4%)

Query: 275 LIFYSAIGLVFGGLILVFILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELA 334
           LI  + + LV G L    I R+++ PL+T  + ++ IASG  DL++        E   L 
Sbjct: 291 LIVSTLLALVLGVLAAWLITRQIILPLRTTMADVERIASG--DLSETAQIQRRDELGVLQ 348

Query: 335 LGFNSFTEMLGSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQ-------QLQELEQLA 387
            G     + +GS +R+L     G+ DG  + +  AE    V +Q       Q +E +Q+A
Sbjct: 349 RGI----QQMGSTLREL---IGGIRDGVSQISAAAEELSAVTQQTSAGVNSQKEETDQVA 401

Query: 388 TAMNEMAMTASEVANSAQVAADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVK 447
           TAM+EM+ T  EVA +A+ AA AA E +S + EG  VV E    I+R++  +  S E + 
Sbjct: 402 TAMHEMSATVQEVARNAEQAALAATEADSEAREGDRVVTEVVTQIERMASAVVRSTEAMT 461

Query: 448 ELVKATDRIETVLDVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQ 507
            L + +D+I +V++VI  +A+QTNLLALNAAIEAARAGE+GRGFAVVADEVR LAQRTQ+
Sbjct: 462 ALQEESDKIGSVMNVIRAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQK 521

Query: 508 STMQISEIIEQLQEGAKNVSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQ 567
           ST +I  ++  LQ G + V+  M  S+  TD  VE   +    +  + + +  I  MN Q
Sbjct: 522 STEEIEGLVAALQNGTQQVASIMHTSRDLTDSGVELARRAGASLGSITRTVSNIQAMNQQ 581

Query: 568 IASAAEEQSLVAEEINNNTVNIKDLSIKLSEAASNAGTEMNAQVSKVKEQNELL 621
           IA+AAEEQS VAEEI+ + VN++D+S + + AAS      + +++++  Q +++
Sbjct: 582 IAAAAEEQSAVAEEISRSVVNVRDVS-EQTAAASEETAASSTELARLGGQLQMM 634