Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  214 bits (546), Expect = 6e-60
 Identities = 130/352 (36%), Positives = 205/352 (58%), Gaps = 3/352 (0%)

Query: 275 LIFYSAIGLVFGGLILVFILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELA 334
           +IF     L   GL L ++ R ++ PL+   +A + +A+G  DLT  ++ + + E + L 
Sbjct: 193 IIFVVIAALCTIGLAL-WLTRSIVGPLQRAVTAAEQVANG--DLTHTIEVDGEDEVTRLL 249

Query: 335 LGFNSFTEMLGSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMA 394
                    L   +R + + A+ +   A +  +  E S   + QQ  E++Q ATA+NEM 
Sbjct: 250 RALAMMQVNLREAMRHIGSSATQLASAATELNSVTEDSYRGLNQQNAEIDQAATAINEMT 309

Query: 395 MTASEVANSAQVAADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATD 454
               EVA +A   +DA+ +  +++L G + V ET  +IQ L+  + ++   V+ L   + 
Sbjct: 310 SAVEEVARNAVSTSDASNQSSTSALAGQTRVIETVQSIQTLTDNVQATSTLVQNLANQSQ 369

Query: 455 RIETVLDVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISE 514
            I  VLDVI  IA+QTNLLALNAAIEAARAGESGRGFAVVADEVR LA RTQQST++I  
Sbjct: 370 DIGKVLDVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAHRTQQSTLEIDS 429

Query: 515 IIEQLQEGAKNVSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEE 574
           ++  ++ G+     SM+ S+   D  +       E +S +  +I++IS+ NL IASAAEE
Sbjct: 430 MVSAMRSGSAQALDSMNTSRARADSTLALAKGAGESLSEITSSINQISERNLVIASAAEE 489

Query: 575 QSLVAEEINNNTVNIKDLSIKLSEAASNAGTEMNAQVSKVKEQNELLNEFKI 626
           Q+ V+ E++ N VNI+DLS++ ++ A+      +       + N++++ FK+
Sbjct: 490 QAQVSREVDRNIVNIRDLSMQSTQGANQISASSHELSRLAADLNQVVSRFKV 541