Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  295 bits (754), Expect = 5e-84
 Identities = 204/644 (31%), Positives = 341/644 (52%), Gaps = 36/644 (5%)

Query: 1   MNVGFVKKLIFISSFILLVTVA-FVVWEGYTTAKKEVSVVIEDGINEIINKTERFVSLKL 59
           MN+ F  K++  ++ ++++  A F ++  Y   +K ++  +E  + +    T   V   L
Sbjct: 1   MNLKFRHKILLAAAGVVVLAFALFTLYNDYLQ-RKTINQNLESSVGQAGQLTASSVQNWL 59

Query: 60  ESDISLASSIVDSISLRISDEQYINDIINGNAIKKAFLSTGFGF----DSNGKVIENDPN 115
              I +  ++  +++      Q +N  ++G   + A +ST F F    DS G   +  PN
Sbjct: 60  SGRILVLENLTQNVAF-----QGVNSDLSGLVSQSALVST-FQFTYVGDSKGTFTQR-PN 112

Query: 116 WEPEDDYDPRSRGWYQEAKKNKRIFITEPYLDTEGKNFLVSISSPVADTMNNFIGAMYFD 175
            +    YDPR R WY+      +  ++ PYL + G   +V+I+SPV        G +  D
Sbjct: 113 VDMPAGYDPRQRPWYKSTVDAGKTILSAPYLASVG-GLVVTIASPVK-AAGQVTGVVGGD 170

Query: 176 VDLSRIQKNVDDINLFEAGYVFITSNTGKVIIHSNTDELGKNVKDIYNG--FRLDKGKVV 233
           + L  + K ++ +     GY F+ S  G++I+  + +++ KN+KDIY G    LD     
Sbjct: 171 LSLDTLVKIINSVEFGGLGYAFLVSGDGQIIVSPDKEQVMKNLKDIYPGQTISLDARLRE 230

Query: 234 LSVNGVNKWLYTSPILG---GDWFIIAVIDESIAMQSINKMKYELIFYSAIGLVFGGLIL 290
           +++NG  + L  +PI G    DW+I   ID+  A   +++ +   +    I +    L+L
Sbjct: 231 VTLNGQQRLLSFTPITGLPSADWYIGLSIDKDKAYAPLSQFRSSAMVAVLIAVAVIALLL 290

Query: 291 VFILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQIRQ 350
             ++R LM PL  +  A++DIA G GDLT++L      EF+ L   FN F E + + I +
Sbjct: 291 SLLIRALMRPLTDMGRAMQDIAQGEGDLTRRLSIQGKDEFAALGGSFNQFVERVHASIVE 350

Query: 351 LKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAADA 410
           + +    V D +++  N +  S +  ++Q      +A A+NE+     E+A +A  A+  
Sbjct: 351 VSSATLQVHDLSQRVVNSSNSSIVGFDEQSARTNNVAAAINELGAATQEIARNASDASIQ 410

Query: 411 AKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIADQT 470
           A E  + + +G  VV +T  A+  LS +I  S   +++L  +T+ I  +LDVI  I+ QT
Sbjct: 411 ASEARNQAEDGQVVVEKTIHAMSALSAKISDSCTQIEQLNASTENIGHILDVIKGISQQT 470

Query: 471 NLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSRSM 530
           NLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQ S  +I ++I  LQ G+++   +M
Sbjct: 471 NLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQTSADEIHKMIGSLQSGSQHAVLNM 530

Query: 531 DESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEIN-----NN 585
           +ES+  +   VE  NQ   ++  V + I  I  MN  +A+A EEQ+ V E +N      N
Sbjct: 531 NESQTSSQESVEVANQAGSRLRDVTRRIGDIDGMNQSVAAATEEQTAVVETLNIDINQIN 590

Query: 586 TVN---IKDLSIKLSEAASNAGTEMNAQVSKVKEQNELLNEFKI 626
           T+N   + +L+  L + A+     ++ Q  ++K   +L++ FKI
Sbjct: 591 TLNQQGVANLNETLKDCAA-----LSQQAGRLK---QLVDSFKI 626