Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  238 bits (608), Expect = 5e-67
 Identities = 145/458 (31%), Positives = 253/458 (55%), Gaps = 12/458 (2%)

Query: 178 LSRIQKNVDDINLFEAGYVFITSNTGKVIIHSNTDELGKNVKDIYNG------FRLDKGK 231
           L  + + +    L E+G+V++    G+V +HS+  ++ K   +   G       R D   
Sbjct: 182 LDAMVQRLTSFKLEESGFVYLVDAKGEVQLHSDPGKIRKATLNSLYGKSGSLLSRADFNY 241

Query: 232 VVLSVNGVNKWLYTSPILGGDWFIIAVIDESIAMQSINKMKYELIFYSAIGLVFGGLILV 291
           + + V+G    + +S +   DW+++A + E+     +++   +++F + +  +   ++  
Sbjct: 242 MEVEVDGQPMMVASSYLPSIDWYLVAQVPEAEVFALLDEAALKILFSTLLIALAFVVLSG 301

Query: 292 FILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQIRQL 351
           F+   +  P+  +    +DI  G GDL ++L    + E ++LA GFNSF   +   + ++
Sbjct: 302 FVASSVSKPIAAVARMFRDIGEGEGDLRQRLPVQGEDELAQLASGFNSFISKIQDSVIEV 361

Query: 352 KTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAADAA 411
              +  +   A   + +A+ +    + Q     Q+ TA+NEM  T +E+A +A  AA+AA
Sbjct: 362 AQTSEQLGKSAIDVSRQAQQTLEDSQDQKDRTMQVVTAINEMGATVNEIAANAAQAAEAA 421

Query: 412 KEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIADQTN 471
           K+ + AS  G  VV +  D I +LS  +    E ++ L   T  I ++LDVI  I++QTN
Sbjct: 422 KDADRASGSGQKVVTQARDTINQLSKDVSQVGEVIESLATHTKSIGSILDVIRAISEQTN 481

Query: 472 LLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSRSMD 531
           LLALNAAIEAARAGE+GRGFAVVADEVR LA RT  ST ++  +I++LQ  +     +M 
Sbjct: 482 LLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAASTDEVQVMIDKLQSESARAVNAMS 541

Query: 532 ESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVNIKD 591
           +S+  +   V   ++ +  +S +   I  ISDMN+Q+A+A EEQS V E+IN N   I D
Sbjct: 542 QSRSRSQEGVSAVDEASNTLSGISDQIGLISDMNIQVAAATEEQSTVVEDINRNVTEIND 601

Query: 592 LSIK---LSEAASNAGTEMNAQVSKVKEQNELLNEFKI 626
           ++ +    ++AA+ A  ++NA  +++   ++L+  FK+
Sbjct: 602 ITQRTAATAQAAARASKDLNALATRL---DQLVARFKV 636