Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  228 bits (580), Expect = 9e-64
 Identities = 166/535 (31%), Positives = 279/535 (52%), Gaps = 34/535 (6%)

Query: 120 DDYDPRSRGWYQEAKKNKRIFITEPYLD--TEGKNFLV-SISSPVADTMNNFIGAMYFDV 176
           +++  R   WY  AK  ++  + EPYL   T G N L+ S++ P+      F G +  D+
Sbjct: 176 NEFGLREAEWYLCAKDTQKPCLMEPYLYEITPGNNMLMTSLTVPIVRG-GRFRGVVGVDL 234

Query: 177 DLSRIQKNVDDIN--LFEA-GYVFITSNTGKVIIHSNTDE--------LGKNVKDIYNGF 225
           +L   QK +++++  L++    V + S  G ++  S+ D+        + K++ +   G 
Sbjct: 235 NLPVFQKMIEELSASLYQGQAKVTLLSTKGLIVAASHYDKKARPLGEAIDKSLANQILGL 294

Query: 226 RLDKGKVVLSVNGVNKWLYTSPILGGDWFIIAVIDESIAMQSINKMKYEL---------- 275
               G ++   + +  +    P+ G  W +   +   IA+ S  +++  +          
Sbjct: 295 GKGDGYLLNDSSMIVAYPINIPLSGSQWLLAIEVPRQIALASAEQVEGSMQAMAASLGRF 354

Query: 276 IFYSAIGLVFGGLILVFI-LRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELA 334
           +    IG+    +IL+ + +R +++P++ +   +  +AS  GDLT+ L  +   E   L 
Sbjct: 355 VLLLGIGIAAVAVILIALFIRSVVAPIQQIQQRVSQLASAEGDLTQSLKVDEHAELIALG 414

Query: 335 LGFNSFTEMLGSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMA 394
            GFN+F   L   I +LK +A+   + ++ TA  AE ++  V +Q  E+E + TA+NEM+
Sbjct: 415 NGFNAFIGKLHGLISELKKVATESRNESQATARIAEETKQSVNRQYSEIESVVTAVNEMS 474

Query: 395 MTASEVAN-SAQVAADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVED---VKELV 450
            TA EVA  S Q A+++A       +   S+    T A+  +S     S++    V ++ 
Sbjct: 475 HTAHEVAKASEQTASESAAMASQVKVSQDSL----TQAVSLVSTMSKESLQAKIAVGKVA 530

Query: 451 KATDRIETVLDVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTM 510
           +++  I  +L+VI+ IA QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA +TQ ST 
Sbjct: 531 ESSTNISKILEVISAIAAQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASKTQASTD 590

Query: 511 QISEIIEQLQEGAKNVSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIAS 570
            IS +I+ L++  K  S  +D+     +  V +T Q  E +S++   I+ IS+   QIA+
Sbjct: 591 DISRLIDALEQEVKGASGIIDKGVGLAEQAVAQTEQAFEALSVMVAGINEISNQVTQIAT 650

Query: 571 AAEEQSLVAEEINNNTVNIKDLSIKLSEAASNAGTEMNAQVSKVKEQNELLNEFK 625
           AAEEQS V EE++ N   I D + +L + A  A     +    V  Q   L + +
Sbjct: 651 AAEEQSAVTEEVSRNITGISDSAAELMDLAGKARESSESLAKLVGRQESQLAKLR 705