Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  224 bits (572), Expect = 6e-63
 Identities = 137/368 (37%), Positives = 215/368 (58%), Gaps = 2/368 (0%)

Query: 259 IDESIAMQSINKMKYELIFYSAIGLVFGGLILVFILRRLMSPLKTLDSAIKDIASGGGDL 318
           +D+  A +     +Y L+F    G V    +L+ I R +  PL+    A K+IA G  +L
Sbjct: 189 VDDIAAQKQEFTWQYLLVFLLVWGPVMA--LLLMISRSVTEPLQRTLMAFKNIAEGEANL 246

Query: 319 TKKLDTNLDKEFSELALGFNSFTEMLGSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQ 378
           T +L+     E S++++ FN+F   + S +  ++         +   +N A  +      
Sbjct: 247 TLRLEERGRDELSQVSVYFNAFVGRIQSLVISVRDSVDHSRQLSSSLSNVAHQAAHATNS 306

Query: 379 QLQELEQLATAMNEMAMTASEVANSAQVAADAAKEGESASLEGSSVVHETTDAIQRLSIR 438
             QE + +A A+N+M+ TASEVA +AQ+AA +AK  +S +   + VV      +++LS  
Sbjct: 307 MQQETQSVAAAINQMSATASEVAANAQLAAKSAKNADSQADSTNLVVTHAMGNVRQLSSE 366

Query: 439 IGSSVEDVKELVKATDRIETVLDVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEV 498
           +  + E  K L  ++  I  +LDVI  IA+QTNLLALNAAIEAARAGE+GRGFAVVADEV
Sbjct: 367 LEETSEIAKALKVSSGEIGQILDVIVGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEV 426

Query: 499 RTLAQRTQQSTMQISEIIEQLQEGAKNVSRSMDESKLETDIVVEKTNQVNEKISLVQQAI 558
           RTLA RTQQST +I+ IIE ++     V+ S+  ++ ++D  V++T QV + + L++QAI
Sbjct: 427 RTLASRTQQSTQEINAIIEAIRGAVDKVNASVARARQQSDNTVDETAQVMDALGLIKQAI 486

Query: 559 HRISDMNLQIASAAEEQSLVAEEINNNTVNIKDLSIKLSEAASNAGTEMNAQVSKVKEQN 618
            +I+DMNLQIA+A +EQS V  E+N N   I ++S++    +   G   +      ++  
Sbjct: 487 GQINDMNLQIATATDEQSAVIAELNENINRINEISVENLSKSETVGHTSDRIAEDSRQMA 546

Query: 619 ELLNEFKI 626
           +L+  FK+
Sbjct: 547 QLIAVFKV 554