Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  227 bits (578), Expect = 1e-63
 Identities = 131/339 (38%), Positives = 209/339 (61%)

Query: 288 LILVFILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQ 347
           LIL  I R + +P+    +A ++IA G GDLT +L+ +   E  ++A  FN F   + + 
Sbjct: 210 LILGVISRSISAPMADTIAAFENIARGEGDLTLRLEESGRDELKQVAASFNEFVAKIQAL 269

Query: 348 IRQLKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVA 407
           +  +    +   + AE  A+ +  + +V      E + +ATA+NEM+M +SEVA++AQ+A
Sbjct: 270 VNSVSASVTHSRELAEGLADISAQASMVTANMQAETQSVATAINEMSMASSEVASNAQLA 329

Query: 408 ADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIA 467
           AD+A   +  + +  +VV      I+ LS  +  + ++ + L  ++ +I  +LDVI  IA
Sbjct: 330 ADSAGSADGEADDTVAVVDGAVAKIKGLSNELEVTADEAQALQISSGKIGQILDVIVGIA 389

Query: 468 DQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVS 527
           +QTNLLALNAAIEAARAGE+GRGFAVVADEVRTLA RTQ+ST +I+ IIE ++    +V+
Sbjct: 390 EQTNLLALNAAIEAARAGEAGRGFAVVADEVRTLASRTQESTQEINAIIEAIRASVDSVN 449

Query: 528 RSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTV 587
            S+  +K +++  V +T+QV E +  ++ +I +ISDMN+QIA+A EEQS V  E+N N  
Sbjct: 450 ASVARAKAQSEQTVGETSQVVEALQTIKSSIRQISDMNIQIATATEEQSAVIAELNMNVT 509

Query: 588 NIKDLSIKLSEAASNAGTEMNAQVSKVKEQNELLNEFKI 626
            I D+S++  + +   G+      S   +   L++ FK+
Sbjct: 510 RINDISLENQQKSEEIGSTSEQIKSGSADLESLISTFKL 548