Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  209 bits (533), Expect = 2e-58
 Identities = 126/394 (31%), Positives = 209/394 (53%), Gaps = 11/394 (2%)

Query: 244 YTSPILGGDWFII--AVIDE---------SIAMQSINKMKYELIFYSAIGLVFGGLILVF 292
           Y + + G DW +   A  D+          +  + +N     ++ ++ + +    ++++ 
Sbjct: 161 YAATVPGKDWILGTGAYTDDIDAQVESYREVMTKHMNDKAMMILLFALVLVAITAVVMLV 220

Query: 293 ILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQIRQLK 352
             +R+++P+  +   ++DIA G GDLTK+LD     E + L   FN F + L   I+ + 
Sbjct: 221 AAQRMVNPIHNMVQNLEDIAKGEGDLTKRLDVQGSDEIAMLGRAFNQFVDKLQGIIKDVA 280

Query: 353 TIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAADAAK 412
                V  GA+  +++       +     E +Q+ TA+ EM+ TASEVA S    A+A +
Sbjct: 281 RATVEVKSGADNISSQTAAMAQQLISHNNETDQVVTAITEMSATASEVAMSTTQVAEATQ 340

Query: 413 EGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIADQTNL 472
                       V  +   +  L   I  +   +  L + + +I +VL VI  IA+QTNL
Sbjct: 341 AATQDVGNAQECVDSSLHEVSTLMAEIDMAAGHINSLNEQSQKINSVLSVIGGIAEQTNL 400

Query: 473 LALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSRSMDE 532
           LALNAAIEAARAGE GRGFAVVADEVR+LA RTQ ST++I+E++ +L         SM+ 
Sbjct: 401 LALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASTLEINEMLSELHNLVSLAVSSMES 460

Query: 533 SKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVNIKDL 592
           S+      V  +  +++ +  V  A+  I+DM+ QIA+AA EQS V EEIN N   I+++
Sbjct: 461 SQQSCHRSVTSSRAISDSLGAVTSAVTSINDMSTQIATAATEQSSVTEEINRNVFAIQEI 520

Query: 593 SIKLSEAASNAGTEMNAQVSKVKEQNELLNEFKI 626
             +L +A+++A        ++ +  + L+ +FK+
Sbjct: 521 VNELLQASNSASDTSQGLANEGRNLDTLVGQFKV 554