Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  221 bits (563), Expect = 6e-62
 Identities = 139/369 (37%), Positives = 213/369 (57%), Gaps = 10/369 (2%)

Query: 265 MQSINKMKYE-LIFYSAIGLVFGGLILVFIL---RRLMSPLKTLDSAIKDIASGGGDLTK 320
           +  + +  YE ++ Y  I  +    I  F L     + SPL     A++DIA G GDL++
Sbjct: 180 LSDVKESLYEVMVDYLIIMFLISVPIFAFFLVLNHSITSPLNDAIEALEDIAQGEGDLSQ 239

Query: 321 KLDTNLDKEFSELALGFNSFTEMLGSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQQL 380
           +L T    E + LA  FN F + +G  +  L+ +   + + A+      E S    E   
Sbjct: 240 RLSTQGKDEVAHLAHAFNLFAQKIGDMVGHLQPLGQSLDNDAKLLMLAVEESNQSAEHIH 299

Query: 381 QELEQLATAMNEMAMTASEVANSAQVAADAAKEGESASLEGSSVVHETTDAIQRLSIRIG 440
           +E   +ATA+N+M  T  E+A++ Q AADAA   +S + +   V+  T    ++L   + 
Sbjct: 300 RETGSVATAVNQMLSTTHEMASNTQQAADAATSVKSQAQQSKGVIDNTVRDTEKLVQELK 359

Query: 441 SSVEDVKELVKATDRIETVLDVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRT 500
           +S    ++L +A+ +I ++LDVI  IA+QTNLLALNAAIEAARAG  GRGFAVVADEVR 
Sbjct: 360 ASEAITQKLGQASGQIGSILDVIRAIAEQTNLLALNAAIEAARAGSHGRGFAVVADEVRA 419

Query: 501 LAQRTQQSTMQISEIIEQLQEGAKNVSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHR 560
           LA RTQ ST +I +II ++Q G  +V +S  +++ +++ +  K  +  + ++ + + I  
Sbjct: 420 LANRTQDSTNEIQKIISEIQTGVGSVMQSNSQTQRQSEELQAKAQEAGQAMAAILELIAH 479

Query: 561 ISDMNLQIASAAEEQSLVAEEINNNTVNIKDL---SIKLSEAASNAGTEMNAQVSKVKEQ 617
           ISDMN Q+ASA EEQSLV EEIN N  NI +L   S+K +E+ S A   +   +S  ++ 
Sbjct: 480 ISDMNTQLASATEEQSLVTEEINRNICNISELTEVSVKANESNSRAAQSLQ-DIS--QDM 536

Query: 618 NELLNEFKI 626
           +  L +FKI
Sbjct: 537 SHTLGQFKI 545