Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  259 bits (661), Expect = 3e-73
 Identities = 155/371 (41%), Positives = 222/371 (59%), Gaps = 6/371 (1%)

Query: 259 IDESIAMQSINKMKYELIFYSAIGLVFGGLILVFILRRLMSPLKTLDSAIKDIASGGGDL 318
           +D S + Q+++ ++ +LI    I L+ G  I  FI + +  P+     A+ DIA G GDL
Sbjct: 267 LDRSHSEQAMSDIRLKLIMIGVIALLIGTAIAWFIAKSITRPIAETTDALNDIAEGEGDL 326

Query: 319 TKKLDTNLDKEFSELALGFNSFTEMLGSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQ 378
           T++++     E ++LA  FN F E + + + Q+    S +   AE+ +     ++ +  +
Sbjct: 327 TRRIEVKSKDEMAQLAQAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITHETQQMANR 386

Query: 379 QLQELEQLATAMNEMAMTASEVANSAQVAADAAKEGESASLEGSSVVHETTDAIQRLSIR 438
           Q  E EQ+ATAMNEMA T  EVA++A  AADAA     ++ +G  +V +    I  L+  
Sbjct: 387 QHLETEQVATAMNEMAATVQEVAHNATDAADAATHASESTEQGKLLVEKVISTISLLADE 446

Query: 439 IGSSVEDVKELVKATDRIETVLDVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEV 498
           I  +   + EL + T +I++VL VI +IADQTNLLALNAAIEAARAGE GRGFAVVADEV
Sbjct: 447 IAQAANAINELERNTTQIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEV 506

Query: 499 RTLAQRTQQSTMQISEIIEQLQEGAKNVSRSMDESKLETDIVVEKTNQVNEKISLVQQAI 558
           RTLA RTQ ST +I ++IE LQ+ AK    SM+ S   T   V   ++    +  + QA+
Sbjct: 507 RTLASRTQASTTEIQQMIETLQQSAKATVSSMNTSTATTQSCVSLVHEAGSALEAITQAV 566

Query: 559 HRISDMNLQIASAAEEQSLVAEEINNNTVNIKDLSIKLSEAA---SNAGTEMNAQVSKVK 615
             IS MN+QIASAA EQ  V+ EIN N  NI D++   +E+A   + AG E+ AQ+S   
Sbjct: 567 STISQMNIQIASAANEQCAVSAEINKNVNNINDIATNATESAMQTARAGDEL-AQLS--M 623

Query: 616 EQNELLNEFKI 626
               LL++FKI
Sbjct: 624 RLTTLLSQFKI 634