Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  223 bits (567), Expect = 2e-62
 Identities = 153/477 (32%), Positives = 248/477 (51%), Gaps = 32/477 (6%)

Query: 181 IQKNVDDINLFEAGYVFITSNTGKVIIHSNTDEL-GKNVKDIYN--GFRLDKGKVVLSVN 237
           + + + DI    +GY F+  + GK + H+    L G+N  D+ +  G ++  G +  + N
Sbjct: 79  VNQALRDIRFGSSGYFFLYDSQGKNLFHAVMPNLEGQNKIDMTDPRGTKIIVGLLNAAKN 138

Query: 238 G----------------VNKWLYTSPILGGDWF---------IIAVIDE---SIAMQSIN 269
           G                + K  Y+  I G DW          I AV+++   ++  Q I+
Sbjct: 139 GDGNFSFYFQKPNTNEQIEKIGYSMMIPGTDWMLGTGAYIDDIDAVVEDYRTTVTEQMID 198

Query: 270 KMKYELIFYSAIGLVFGGLILVFILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKE 329
           K    L+    +  +   +ILV   +R+++P+K +   + DIA G GDLTK+L    D E
Sbjct: 199 KSYAILLIALLLAAITAPVILV-TAQRMVTPIKNMADNLNDIAKGEGDLTKRLAVKGDDE 257

Query: 330 FSELALGFNSFTEMLGSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATA 389
            ++L   FN F + L + I  +    + V   A    ++ +V    +     E +Q+ TA
Sbjct: 258 IAQLGRSFNLFVDKLQTIIGDVAHATAKVKTAANAIHDQTKVMSRQLISHNNETDQVVTA 317

Query: 390 MNEMAMTASEVANSAQVAADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKEL 449
           + EM+ TASEVA +    A+A              V  + + I  L  +I ++  +++ L
Sbjct: 318 ITEMSATASEVAQNTTQVAEATHAATGDVANAQRCVDASLEEISALMAQINNAASNIQSL 377

Query: 450 VKATDRIETVLDVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQST 509
            + + +I +VL VI  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ ST
Sbjct: 378 SEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQSST 437

Query: 510 MQISEIIEQLQEGAKNVSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIA 569
           ++I+E++ +L +      ++M+ES+      V+ +  ++E +  V  A+  I+DM+ QIA
Sbjct: 438 LEINEMLSELHKLVSLAVKTMEESQQSCIRSVDSSRAISESLGSVTSAVTAINDMSTQIA 497

Query: 570 SAAEEQSLVAEEINNNTVNIKDLSIKLSEAASNAGTEMNAQVSKVKEQNELLNEFKI 626
           +AA EQS V EEIN N   I+++  +L  ++  A +       +     +L+ +FKI
Sbjct: 498 TAATEQSSVTEEINRNVFAIQEIVNELLHSSEEAASVSQTVSQEGLNLGKLVGQFKI 554