Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  225 bits (573), Expect = 5e-63
 Identities = 154/480 (32%), Positives = 241/480 (50%), Gaps = 30/480 (6%)

Query: 177 DLSRIQKNVDDINLFEAGYVFITSNTGKVIIHSNTDEL-GKNVKDIYN--GFRLDKGKVV 233
           D   + + + DI    AGY FI  + GK I H+    L G+N  D+ +  G ++  G + 
Sbjct: 75  DQGNVNQALRDIRFGSAGYFFIYDSQGKNIFHALMPNLEGQNKIDMTDPRGTKIIVGLLD 134

Query: 234 LSVNG----------------VNKWLYTSPILGGDWFI--------IAVIDESIAMQSIN 269
            +  G                + K  Y   + G DW +        I  + E        
Sbjct: 135 AAKRGDGNFSYYYQKPNTNEQIEKISYVMMVPGTDWMLGTGAYIDDIEAVVEDYRQTVTE 194

Query: 270 KMKYELIFYSAIGLVFGGL---ILVFILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNL 326
           +M  +      I LV  G+   I++    R++ P+K +  ++ DIA G GDLTK+L    
Sbjct: 195 QMADKSFMILLIALVLTGITAFIIMVAAHRMVVPIKNMADSLNDIAKGEGDLTKRLSVKG 254

Query: 327 DKEFSELALGFNSFTEMLGSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQL 386
           + E ++L   FN F + L + I  +    + V   A    ++ +V    +     E +Q+
Sbjct: 255 EDEIAQLGQAFNLFVDKLQTIIGDVANATAKVKSAANAIHDQTKVMSSQLLSHNNETDQV 314

Query: 387 ATAMNEMAMTASEVANSAQVAADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDV 446
            TA+ EM+ TASEVA +    A+A +            V  + + I  L  +I ++   +
Sbjct: 315 VTAITEMSSTASEVAQNTTQVAEATQAATGDVANAQRCVDASLEEIAGLMSQINNAAGSI 374

Query: 447 KELVKATDRIETVLDVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQ 506
           K L + + +I +VL VI  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ
Sbjct: 375 KSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQ 434

Query: 507 QSTMQISEIIEQLQEGAKNVSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNL 566
            ST++I+E++ +L +      ++MDES+      V+ +  ++E +  V  A+  I+DM+ 
Sbjct: 435 ASTLEINEMLSELHKLVSVAVKTMDESQQSCVRSVDSSRAISESLGSVTSAVTAINDMST 494

Query: 567 QIASAAEEQSLVAEEINNNTVNIKDLSIKLSEAASNAGTEMNAQVSKVKEQNELLNEFKI 626
           QIA+AA EQS V EEIN N   I+++  +L  ++ +A         +     +L+ +FKI
Sbjct: 495 QIATAATEQSSVTEEINRNVYAIQEIVNELLHSSEDAAKVSQTVSQEGINLGKLVGQFKI 554