Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  224 bits (570), Expect = 1e-62
 Identities = 139/362 (38%), Positives = 210/362 (58%), Gaps = 9/362 (2%)

Query: 271 MKYELIFYSAIGLVFGGLILVFIL---RRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLD 327
           +K  +I Y  I  +    I  F L     + SPL     A++DIA G GDL+++L T   
Sbjct: 187 LKAVIIDYLIIMFLISVPIFAFFLVLNHSITSPLNDAIDALEDIAQGEGDLSQRLSTQGK 246

Query: 328 KEFSELALGFNSFTEMLGSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLA 387
            E + LA  FN F + +G  +  L+ +   + + A++     E S    E   +E   +A
Sbjct: 247 DEVAHLAHAFNLFAQKIGDMVGHLQPLGQSLDNDAKQLMLAVEESNQSAEHIHRETGSVA 306

Query: 388 TAMNEMAMTASEVANSAQVAADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVK 447
           TA+N+M  T  E+A++ Q AADAA   ++ + +  +V+ +T    ++L   + +S    +
Sbjct: 307 TAVNQMLSTTHEMASNTQQAADAANSVKNQAQQSQAVIDDTVRDTEKLVQELRASEVITQ 366

Query: 448 ELVKATDRIETVLDVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQ 507
           +L +++ +I ++LDVI  IA+QTNLLALNAAIEAARAG  GRGFAVVADEVR LA RTQ 
Sbjct: 367 KLGQSSAQIGSILDVIRSIAEQTNLLALNAAIEAARAGSHGRGFAVVADEVRALANRTQD 426

Query: 508 STMQISEIIEQLQEGAKNVSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQ 567
           ST +I +II  +Q G  +V +S  +++ ++D +  K  +    ++ + Q I  ISDMN Q
Sbjct: 427 STNEIQKIISDIQMGVNSVMKSNSQTQTQSDELQAKAREAGNAMAAILQLIAHISDMNTQ 486

Query: 568 IASAAEEQSLVAEEINNNTVNIKDL---SIKLSEAASNAGTEMNAQVSKVKEQNELLNEF 624
           +ASA EEQSLV EEIN N  NI +L   S+K +E  S A   +   +S  ++ +  L +F
Sbjct: 487 LASATEEQSLVTEEINRNICNISELTEVSVKANEGNSRAAQSLQ-DIS--QDMSHTLGQF 543

Query: 625 KI 626
           KI
Sbjct: 544 KI 545