Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  240 bits (612), Expect = 2e-67
 Identities = 148/462 (32%), Positives = 253/462 (54%), Gaps = 17/462 (3%)

Query: 181 IQKNVDDI-------NLFEAGYVFITSNTGKVIIHSNTDELGKN-VKDIYNGF------- 225
           + K++DD+        + E G+V++    G+V +H +  ++GK+ +K +Y+G        
Sbjct: 178 LAKSLDDMVRLLGSFKIEETGFVYLVDAKGEVKLHPDASQIGKSSLKSLYSGANISSLLN 237

Query: 226 RLDKGKVVLSVNGVNKWLYTSPILGGDWFIIAVIDESIAMQSINKMKYELIFYSAIGLVF 285
           R D   +   + G N ++ +S I   DW+++A + E+     +    Y+++ ++ I +  
Sbjct: 238 RSDFNLIDTQIQGENTFVASSYIPSMDWYLVAQVPEAEVFALLTDAAYQILIWTLI-IAA 296

Query: 286 GGLILVFILRRLMS-PLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEML 344
           G ++L  ++   +S P+  + +  +DI  G GDL ++L    + E ++LA GFNSF   +
Sbjct: 297 GFIMLAIVVAGSVSRPIAQVAAMFRDIGEGEGDLRQRLPVKGEDEIAQLAQGFNSFISKI 356

Query: 345 GSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSA 404
              + ++   +  +   A+  +N+A+ +     +Q      + TA+NEM  T +E+A++A
Sbjct: 357 QDSVIEVAQTSEQLGFSAKDVSNQAQQTLEDSHEQKDRTMMVVTAINEMGATVNEIASNA 416

Query: 405 QVAADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVIN 464
             AA AAK+ ++ S  G  VV    D I +LS  +    E ++ L   T  I  +LDVI 
Sbjct: 417 AQAAVAAKDADTESNSGQVVVTRARDTINQLSQDVEQVGEVIESLATHTKSIGGILDVIR 476

Query: 465 DIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAK 524
            I++QTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RT  ST ++  +I++LQ  A 
Sbjct: 477 AISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAASTNEVQGMIDKLQSEAS 536

Query: 525 NVSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINN 584
               +M +S+  +   V   ++ ++ +  +   I  ISDMN+Q+A+A EEQS V E+IN 
Sbjct: 537 RAVNAMAQSRARSHEGVAAVDEASQSLVGISDRIGLISDMNIQVAAATEEQSTVVEDINR 596

Query: 585 NTVNIKDLSIKLSEAASNAGTEMNAQVSKVKEQNELLNEFKI 626
           N   I +++ + +  A  A     A        + L+ +FK+
Sbjct: 597 NVTEINEITQRTASTAQAAAQASLALNQLAHRLDTLVAKFKV 638