Pairwise Alignments

Query, 271 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., AraC family transcriptional regulator from Rahnella sp. WP5

 Score = 46.6 bits (109), Expect = 6e-10
 Identities = 52/250 (20%), Positives = 104/250 (41%), Gaps = 25/250 (10%)

Query: 27  KPSIIWIEKGECEVLYRNESRILTSGVILAFNKNKRIRITNKSCDNIINIISLIKVPDVD 86
           KP ++ I+ G   +  + +   L +G +L  N  + + +T+    N       I   D  
Sbjct: 32  KPQLVLIQNGSLSITDQAQQVTLQAGEMLVLNSGQTLSMTHHLSGNG-PFSCAIMAWDHQ 90

Query: 87  VLSSSYRNSSGGSVRCFSVNSNFKNMVVMLDYINDLKFDALGREFIVDIFYKYLKDFGL- 145
           +LS +  +++G S    +VN+     + ++ +I         ++   D     L   GL 
Sbjct: 91  LLSDAGLHATGFSPPLLAVNT-----LQVIPHI-----PGAFKQSFTDTHSAILWHHGLP 140

Query: 146 ----LHTMFDY---------RENKDTFLGTDDRVYDYLLSLLPEEQVIKNTCLYFNISRS 192
                H M +          R +        D V + L++ L +            ++  
Sbjct: 141 APITRHRMLEQLLWLSQLGVRYSVQHSESVTDNVRELLVNNLHKSFTAAEVAEKLMMNEV 200

Query: 193 TLIRRLKKCNTTFKNIVRECRMDVAKEIIETKNLDIDYVSMIVGYQSKSKFSNYFFEKYG 252
            L RRL   N   +N++ + RM  A  +++  +L I +++  VGY+S S+F+  F +++G
Sbjct: 201 MLRRRLAGENCVLRNLMIDVRMTHALRLLQCTDLAISHIAHQVGYESGSRFAERFRKRFG 260

Query: 253 VTPMELSGNL 262
             P  + G+L
Sbjct: 261 FAPTAIRGHL 270