Pairwise Alignments

Query, 271 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1333 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 43.1 bits (100), Expect = 3e-08
 Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 127  LGREFIVDIFYKYLKDFGLLHTMFDYRENKDTFLGTDDRVYDYLLSLLPEEQVIKNTCLY 186
            L RE +  I+ K L    +L    +  E +D FL     ++    +L   +  +K     
Sbjct: 1201 LQRERLKRIYTKAL----MLKQESEEGEKEDAFL--QQLIHIIEANLSNADFNVKMLAEQ 1254

Query: 187  FNISRSTLIRRLK-KCNTTFKNIVRECRMDVAKEIIETKNLDIDYVSMIVGYQSKSKFSN 245
             N+S+ TL R++K + + +  +++R  R+  A  +I      I  +S +VGY        
Sbjct: 1255 LNMSQPTLYRKVKQRSDLSVIDMIRSIRISKAATLILENRYSIQEISEMVGYSDTRTLRK 1314

Query: 246  YFFEKYGVTPMELSGNLNK 264
            +F E++GV+P +  G+ ++
Sbjct: 1315 HFMEQFGVSPSKYMGSTDR 1333