Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  212 bits (540), Expect = 3e-59
 Identities = 144/391 (36%), Positives = 222/391 (56%), Gaps = 10/391 (2%)

Query: 140 GKNILPKIRLGFHWKLILLVWGSLFASIAIVSLIYPSALMSILFLT-----LLVGSITTL 194
           GK +   I LG   + I  +   ++AS  +VSL   SA   IL L+     +L+G +  +
Sbjct: 252 GKAVQDTIDLG---ETITRLTDEMYAS-QLVSLGDESAQSRILQLSCTALAMLLGILAAM 307

Query: 195 GITYLLV-PMKRLIQSYCKDSDNPLSQVLYTGRSDEFGQLEFALRMAQAETSAVIGRIGD 253
            IT  +  P++  +    + +   L+Q     R DE G L+  ++        +IG I D
Sbjct: 308 IITRQITRPLQDTLAVVDRIAAGDLTQGTVVTRGDELGVLQQGIQRMGTTLRDLIGGIRD 367

Query: 254 ASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAASIQEVATGAKHAANSSES 313
              Q+   A +L    E+++   + Q+ ET+QVATA+ EM+A++ EVA  A+ A   +  
Sbjct: 368 GVTQIASAAEELSAVTEQTSAGVNSQKTETDQVATAMQEMSATVHEVARNAEQACTVASE 427

Query: 314 ANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSNDISKVLEVIRSIADQTNLL 373
           A+ +   G Q+V+QA   I  L  EV ++   + ELE+ S  I K+++VIR++A+QTNLL
Sbjct: 428 ADAQARIGDQVVAQAIVQIERLASEVGRSVDAMDELEQESARIGKIMDVIRAVAEQTNLL 487

Query: 374 ALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQRMIDTLQGRAKLAVAVMEHS 433
           ALNAAIEAARAG++GRGFAVVADEVRGLA RTQ ST +I+ ++  LQ   +   ++M +S
Sbjct: 488 ALNAAIEAARAGDAGRGFAVVADEVRGLAQRTQHSTEEIESLVAGLQNGTRQVSSIMRNS 547

Query: 434 SQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQQSAVSDEINHSISNIRMAA 493
            +    SVE A +A  +L  I + VS I  M+ Q+A A  QQS+V++EI+ SI N+R  +
Sbjct: 548 RELTDSSVELAGKAGISLGNITQAVSGIQAMNQQIAAAAVQQSSVAEEISRSILNVRDVS 607

Query: 494 DTNVDNGKINAKCAEGVAGLSHNLSELAQQF 524
           +      +  A  +  +A L + L +L   F
Sbjct: 608 EQTASASEETAASSIELARLGNQLQQLVSHF 638