Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  217 bits (553), Expect = 8e-61
 Identities = 135/348 (38%), Positives = 201/348 (57%), Gaps = 4/348 (1%)

Query: 181 ILFLTLLVGSITTLGITYLLV--PMKRLIQ--SYCKDSDNPLSQVLYTGRSDEFGQLEFA 236
           ++ L  L+G I  L +  L+V  PM+RL+       +    L   L    +DE GQL  A
Sbjct: 195 VILLVGLLGCILVLVVLPLVVLSPMRRLLHRVEQIAEGGGDLKGRLEVRSADELGQLGSA 254

Query: 237 LRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAAS 296
                 +   +I  +G  + +++  A  +      ++ L S + A  +QV+TA  +M+A+
Sbjct: 255 FNRFLDKLQPLIAEVGRVTGEVDSAARAMADMAATNDRLISSEHAALDQVSTAATQMSAA 314

Query: 297 IQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSNDI 356
           + EVA  A +A+ +++ A+ ++  G ++VS   +SI +L  EV  A   I  L + ++ I
Sbjct: 315 VHEVAHNAANASGAAQQASSQSRDGAEVVSSTIESIRQLAQEVESASGTIEALAQETSSI 374

Query: 357 SKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQRMI 416
             VLEVIR IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LAARTQ ST DIQ  I
Sbjct: 375 GAVLEVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQDSTKDIQVRI 434

Query: 417 DTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQQS 476
           + LQ     AV  M   S +A  SVE+A      L+G G  +  I  M+ Q+A+A ++QS
Sbjct: 435 ERLQSGVAKAVQAMHVGSTKARDSVERAAGVDQVLSGTGGSIQQINDMAAQIASACEEQS 494

Query: 477 AVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELAQQF 524
           +V++EI  +IS+IR  ++    N   +   ++ ++ LS NL+EL  +F
Sbjct: 495 SVTEEIARNISDIRDLSNEAAANSAQSMHASQQLSSLSRNLAELTGRF 542