Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  210 bits (535), Expect = 1e-58
 Identities = 125/350 (35%), Positives = 208/350 (59%), Gaps = 1/350 (0%)

Query: 176 SALMSILFLTLLVGSITTLGIT-YLLVPMKRLIQSYCKDSDNPLSQVLYTGRSDEFGQLE 234
           S L+    L L++G +    IT  +++P++  +    + +   LS+     R DE G L+
Sbjct: 289 SRLIVSTLLALVLGVLAAWLITRQIILPLRTTMADVERIASGDLSETAQIQRRDELGVLQ 348

Query: 235 FALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMA 294
             ++   +    +IG I D  +Q++  A +L    ++++   + Q+ ET+QVATA++EM+
Sbjct: 349 RGIQQMGSTLRELIGGIRDGVSQISAAAEELSAVTQQTSAGVNSQKEETDQVATAMHEMS 408

Query: 295 ASIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSN 354
           A++QEVA  A+ AA ++  A+ E   G ++V++    I  +   V ++ + +  L+E S+
Sbjct: 409 ATVQEVARNAEQAALAATEADSEAREGDRVVTEVVTQIERMASAVVRSTEAMTALQEESD 468

Query: 355 DISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQR 414
            I  V+ VIR++A+QTNLLALNAAIEAARAGE+GRGFAVVADEVRGLA RTQ+ST +I+ 
Sbjct: 469 KIGSVMNVIRAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEG 528

Query: 415 MIDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQ 474
           ++  LQ   +   ++M  S       VE A++A  +L  I + VS+I  M+ Q+A A ++
Sbjct: 529 LVAALQNGTQQVASIMHTSRDLTDSGVELARRAGASLGSITRTVSNIQAMNQQIAAAAEE 588

Query: 475 QSAVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELAQQF 524
           QSAV++EI+ S+ N+R  ++      +  A  +  +A L   L  +  +F
Sbjct: 589 QSAVAEEISRSVVNVRDVSEQTAAASEETAASSTELARLGGQLQMMVSRF 638