Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  217 bits (552), Expect = 1e-60
 Identities = 140/368 (38%), Positives = 218/368 (59%), Gaps = 19/368 (5%)

Query: 170 VSLIYPSALMSILFLTLLVGSITTLGITYLLVPMKRLIQSYCKDSDNPLSQVLYTGRSDE 229
           V+++  +A   +  +  + G    LG+   +V +++L  +   + D  +++V+    + +
Sbjct: 181 VTVVRETASGFLALIVAVTGVAVLLGVAIAVVIIRKLRSTLGAEPDE-VARVIGNLANGD 239

Query: 230 FGQ----------LEFALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQ 279
            GQ          +    +MA   TS +I  +  A++ +   +++LL +   SN     Q
Sbjct: 240 LGQRIVTPYPDSVMGATAKMASRLTS-IIAEVRTAADGVGTASSELLTSSASSNQQIQRQ 298

Query: 280 QAETEQVATAINEMAASIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEV 339
            AE EQVATAIN+MAA++ EVA+ A +AA +++SA+ +  +G +IV + + SI  L   +
Sbjct: 299 SAEAEQVATAINQMAATVSEVASFAANAATAAKSADEQVETGTRIVGETAVSIHNLAKVL 358

Query: 340 SQAKQVIHELEEHSNDISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVR 399
             A   ++++   S DI K+L+VI +IA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR
Sbjct: 359 ESATDTVNQVSAQSGDIEKILQVITAIAEQTNLLALNAAIEAARAGDHGRGFAVVADEVR 418

Query: 400 GLAARTQQSTMDIQRMIDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVS 459
            LA RTQQS+ +I  MI +LQ  A  AV VM+ S Q A  +VEQ  QA +AL  I + V 
Sbjct: 419 SLANRTQQSSSEISEMIASLQAGAGRAVEVMQSSKQLAQQTVEQTLQAENALAKIRQEVG 478

Query: 460 DITGMSVQMATAVDQQSAVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSE 519
            I  M+ Q+ATA ++QSAV++E+N S++ I        D+   ++  +  VA  S +L+ 
Sbjct: 479 AINEMNAQIATASEEQSAVAEEVNQSVTRIH-------DSTVTSSAASNQVAASSQDLTT 531

Query: 520 LAQQFWER 527
           LAQ+   R
Sbjct: 532 LAQELNRR 539