Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  202 bits (514), Expect = 3e-56
 Identities = 124/349 (35%), Positives = 190/349 (54%), Gaps = 11/349 (3%)

Query: 187 LVGSITTLGITYLLVPMKRLI-----------QSYCKDSDNPLSQVLYTGRSDEFGQLEF 235
           +V ++T +G+  LL+ M   +            +   + +  L++ L     DEFG+L  
Sbjct: 279 VVAALTAVGVILLLLGMLMRVLMRPLTDMGRAMANIAEGEGDLTRRLAVQSKDEFGELAS 338

Query: 236 ALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAA 295
           A           I  +  A+ Q+N+ A  +L     S   + EQ + T  VA AINE+ A
Sbjct: 339 AFNRFVERIHTSIREVSSATQQVNEVAARVLAASNSSMANSDEQASRTNSVAAAINELGA 398

Query: 296 SIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSND 355
           + QE+A  A  A+  +  A H+   G+Q+V Q   ++ EL  ++S +   I  L   + D
Sbjct: 399 AAQEIARNAADASQQASGARHQAEDGRQVVEQNIAAMRELSAKISASCAQIEALNAKTVD 458

Query: 356 ISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQRM 415
           I ++LEVI+ I++QTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQ S  +IQ+M
Sbjct: 459 IGQILEVIKGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQSSAQEIQQM 518

Query: 416 IDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQQ 475
           I+ LQ  A  +V  M  S +Q+  SV  A +A + L  + +R+ +I GM+  +ATA ++Q
Sbjct: 519 IEQLQVGAGASVQTMTESQRQSESSVSIADRAGERLGEVTQRIGEIDGMNQSVATATEEQ 578

Query: 476 SAVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELAQQF 524
           +AV + +N  I+ I       V+N +   +    +   +  L +L   F
Sbjct: 579 TAVIESLNMDITEINTLNQQGVENLQSTLRACGDLDQQARRLKQLVDSF 627