Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  216 bits (549), Expect = 2e-60
 Identities = 134/350 (38%), Positives = 206/350 (58%), Gaps = 7/350 (2%)

Query: 180 SILFLTLLVGSITT-LGITYLLV----PMKRLIQSYCKDSDNPLSQVLYTGRSDEFGQLE 234
           +I  L L++G +   + + ++++     M+  + +  +D D  LS+ +  G  DE G + 
Sbjct: 190 AIQLLLLVIGVVVMCMTVRHVIIRRINAMRHTMNAMAEDED--LSRSVAIGAKDEIGAMG 247

Query: 235 FALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMA 294
            A      +    +  +   ++QL   +  + H  EK+    +EQ++ET+ VA+A+NEM+
Sbjct: 248 DAFNRMIGKFRHSLEAVAGVTHQLTDVSERVSHVAEKTLAAVNEQRSETDMVASAMNEMS 307

Query: 295 ASIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSN 354
           A++QEVA  A   A +S  A+ E+ +G ++ ++A   I  L  E+ +A QVI  +E  S 
Sbjct: 308 ATVQEVARNANQTATASAGADTESKAGVKVATEALDGIEVLIAEIEKAAQVIQRVESDSA 367

Query: 355 DISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQR 414
            I  VL VI  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA+RTQ+ST +IQ 
Sbjct: 368 SIDMVLGVINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQKSTEEIQA 427

Query: 415 MIDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQ 474
           MI+ LQ   + AV  M+ +  +A    +  ++AA +L  I   V  I  M+ Q+ATA +Q
Sbjct: 428 MIEQLQSGVRNAVQAMKEAQLRARSGSQCVEKAAQSLGLIATEVGTINEMNTQIATAAEQ 487

Query: 475 QSAVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELAQQF 524
           QSAV++EIN +IS I   ADT   +    ++ ++ +  L+  L+ L  QF
Sbjct: 488 QSAVAEEINRNISTISRIADTTSTDATQTSEISDELVRLATELNRLVGQF 537