Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 584 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  218 bits (555), Expect = 5e-61
 Identities = 130/356 (36%), Positives = 213/356 (59%), Gaps = 2/356 (0%)

Query: 169 IVSLIYPSALMSILFLTLLVGSITTLGITYLLVPMKRLIQSYCKDSDNPLSQVLYTGRSD 228
           +V+++  SA   ++ + LL   ++   ++ LL+ +KR +    +  D  L+Q L     D
Sbjct: 229 LVTIMLVSAFALLVLMALLAIFMSNALLSPLLL-IKRNLDDMAQ-GDGDLTQRLPITSQD 286

Query: 229 EFGQLEFALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVAT 288
           E G+L  +      +  +++ ++   + QL+     +    ++S    ++Q++ET+QVAT
Sbjct: 287 ELGELAMSFNRFVEKIHSLVQQVAGTTTQLSGLVGAVASQAQRSEQAMADQRSETDQVAT 346

Query: 289 AINEMAASIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHE 348
           AINEM+A+  EVA  A+ AA ++   + + ++ +Q+V Q+ + I EL  E+  + + +  
Sbjct: 347 AINEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIHELVGELRGSGESLEG 406

Query: 349 LEEHSNDISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQS 408
           L++    I  VL+VIR+IA+QTNLLALNAAIEAARAGE+GRGFAVVADEVR LA+RTQQS
Sbjct: 407 LQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQS 466

Query: 409 TMDIQRMIDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQM 468
           T +IQ MID LQ      V+ M  + ++   + +QA QA ++L  I   +  I  M+ Q+
Sbjct: 467 TGEIQGMIDRLQSATSNTVSTMLRAGEKGESTRDQANQAGESLDAISALIGTINSMNAQI 526

Query: 469 ATAVDQQSAVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELAQQF 524
           A A ++Q+AV++EIN S+ +I  A D    +    A+ +  + GL+  L +L  QF
Sbjct: 527 AAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTSRELNGLAERLQKLVGQF 582