Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  200 bits (509), Expect = 1e-55
 Identities = 132/363 (36%), Positives = 208/363 (57%), Gaps = 8/363 (2%)

Query: 168 AIVSLIYPSALMSI-LFLTLLVGSITTLGITYLLV-----PMKRLIQSYCKDSDNPLSQV 221
           A  +  Y   L  + +F+T  VG ITTL + ++       P+   +    + + N LSQ 
Sbjct: 180 AAANAAYQQTLWMVGIFIT--VGVITTLLLAWMYTRSLTGPIGDSLSIAQRIATNDLSQD 237

Query: 222 LYTGRSDEFGQLEFALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQA 281
           +    +DE  +L  AL   Q+     +  IGD+S QL   + ++    E ++     Q  
Sbjct: 238 IPQHGTDEAAKLIAALATMQSNLRNALTLIGDSSTQLAATSEEMHAVTEDASRTILRQTN 297

Query: 282 ETEQVATAINEMAASIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQ 341
           E E  ATA+NEM+A+++EVA+ A  A+  +  ++   ++G+  V +   +I  +  +V  
Sbjct: 298 EIEMAATAVNEMSAAVEEVASNAASASEVTSQSSTAAMAGRAQVDETVTAINLMVSKVQI 357

Query: 342 AKQVIHELEEHSNDISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGL 401
               +  L   + DISKVL+VIR+IA+QTNLLALNAAIEAARAGE+GRGFAVVADEVR L
Sbjct: 358 TSTEVQGLAVMATDISKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRAL 417

Query: 402 AARTQQSTMDIQRMIDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDI 461
           A RTQQST +I++M+D++Q     AV+ ME +S QA  ++E A  A  AL  I + +S I
Sbjct: 418 AHRTQQSTREIEQMVDSIQTGTGNAVSAMEQTSVQAHKTLEMANGAGKALLEITESISQI 477

Query: 462 TGMSVQMATAVDQQSAVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELA 521
              ++ +ATA ++Q+ V+ E++ S+ +IR  +    +     A     ++ L+ +L+ L 
Sbjct: 478 NERNLMIATAAEEQAQVAREVDRSLVSIRDLSSQTSEGSNQTAIATAELSTLASSLNRLT 537

Query: 522 QQF 524
           +QF
Sbjct: 538 KQF 540